ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2114_15

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: 11681..12031

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, HxlR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL5_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 112.0
  • Bit_score: 180
  • Evalue 6.10e-43
transcriptional regulator, HxlR family similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 113.0
  • Bit_score: 181
  • Evalue 1.30e-43
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AIF82139.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 113.0
  • Bit_score: 181
  • Evalue 6.50e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 351
ATGTATAAGAATGAATGCAGTTTTGAGGGATATAATGCAGCAATATTGATGAAGGAAACCGCGAAAATTCGTAAATTAATTACCAAAAGAGGAACAATAGAGATGTTAATACCACTTTGTTGCTCTACAAAGCCAGTAAGATACAAGGAATTTAGACATTTGCTGAAAGGCTTTAGTAGCAAGACGCTGGCTAGGAGATTAAAAGAGTTAGAAAAGGGAGGAATATTACAAAGGCAAGCATACAATGAGATACCTCCCCGAGTAGAATACAAACTTACTTCGAAAGGACAAGAATTAGTGGAATCAATAATTACCCTATTGCAATGGATGAGAAAGTGGTCAAAGTCATAA
PROTEIN sequence
Length: 117
MYKNECSFEGYNAAILMKETAKIRKLITKRGTIEMLIPLCCSTKPVRYKEFRHLLKGFSSKTLARRLKELEKGGILQRQAYNEIPPRVEYKLTSKGQELVESIITLLQWMRKWSKS*