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PLM4_90_b2_sep16_scaffold_558

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_558_1
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(1..417)
DNA (417bp) protein (139aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Short=PIMT {ECO:0000255|HAMAP-Rule:MF_00090};; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hyperthermus butylicus (strain DSM 5456 / JCM 9403).;"
Protein-L-isoaspartate O-methyltransferase Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=PIMT_HYPBU
PLM4_90_b2_sep16_scaffold_558_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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466..792
DNA (327bp) protein (109aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1088..2980)
DNA (1893bp) protein (631aa)
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
hypothetical protein Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00036C48FC
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3135..4100
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC2_NITGG
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4102..4536
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQA6_THELI
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4533..5600)
DNA (1068bp) protein (356aa)
Methyltransferase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP0_METBF
tRNA (Guanine37-N1) -methyltransferase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5605..6399)
DNA (795bp) protein (265aa)
Putative methyltransferase Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHF0_ACEWD
putative methyltransferase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_8
Pyrobaculum aerophilum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(6396..7442)
DNA (1047bp) protein (349aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000255|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000255|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000255|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000255|HAMAP-Rule:MF_00200};; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630; / NBRC 100827).;"
RNA 3'-terminal phosphate cyclase Tax=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) RepID=RTCA_PYRAE
PLM4_90_b2_sep16_scaffold_558_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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7535..7975
DNA (441bp) protein (147aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_10
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(8002..8274)
DNA (273bp) protein (91aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Acylphosphatase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYF7_METFV
acylphosphatase
PLM4_90_b2_sep16_scaffold_558_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

8390..8725
DNA (336bp) protein (112aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8709..8936)
DNA (228bp) protein (76aa)
hypothetical protein Tax=unclassified candidate division pSL4 RepID=UPI000361CE87
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_13
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(9110..10312)
DNA (1203bp) protein (401aa)
GMP synthase Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TSV0_9ARCH
GMP synthase {ECO:0000313|EMBL:EMR73036.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
GMP synthase
PLM4_90_b2_sep16_scaffold_558_14

Not on your lists

comp(10713..11417)
DNA (705bp) protein (235aa)
Orotidine 5'-phosphate decarboxylase (PyrF) {ECO:0000313|EMBL:AIF18829.1}; EC=4.1.1.23 {ECO:0000313|EMBL:AIF18829.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_84_F03.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP18_NITGG
PLM4_90_b2_sep16_scaffold_558_15
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

11588..12022
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Thermofilum sp. 1910b RepID=S6A5M5_9CREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT35337.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
PLM4_90_b2_sep16_scaffold_558_16
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12028..12699)
DNA (672bp) protein (224aa)
B3/4 domain protein Tax=Methanolinea tarda NOBI-1 RepID=G6FH68_9EURY
B3/4
Tax=BJP_S1_SUB10_Methanoculleus_61_9
PLM4_90_b2_sep16_scaffold_558_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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12810..13709
DNA (900bp) protein (300aa)
Permease Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HM53_THES4
Permeases of the drug/metabolite transporter (DMT) superfamily
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13790..14560
DNA (771bp) protein (257aa)
Putative transcriptional regulator Tax=Thermococcus sp. CL1 RepID=I3ZV27_9EURY
transcriptional regulator
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_558_19
unknown

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comp(14620..14760)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 19 items

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