ggKbase home page

PLM4_90_b2_sep16_scaffold_8401

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_8401_1

Not on your lists

1..906
DNA (906bp) protein (302aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B51189
Marine sediment metagenome DNA, contig: S01H4_L00213 {ECO:0000313|EMBL:GAG55735.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_90_b2_sep16_scaffold_8401_2
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

924..1922
DNA (999bp) protein (333aa)
Putative uncharacterized protein Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29983_ARCFU
purP-2; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000313|EMBL:BAI62553.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
PLM4_90_b2_sep16_scaffold_8401_3
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1919..3004
DNA (1086bp) protein (362aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1I2_METPS
purP-3; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
PLM4_90_b2_sep16_scaffold_8401_4
unknown

Not on your lists

3112..3297
DNA (186bp) protein (62aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_8401_5

Not on your lists

comp(3294..4040)
DNA (747bp) protein (249aa)
Putative serine/threonine protein kinase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLY2_9ARCH
Marine sediment metagenome DNA, contig: S01H1_L00574 {ECO:0000313|EMBL:GAF84883.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ser/Thr protein kinase
PLM4_90_b2_sep16_scaffold_8401_6
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

4162..4704
DNA (543bp) protein (181aa)
Elongation factor 2 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=EF2_KORCO
elongation factor EF-2
Elongation factor 2 {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-2 {ECO:0000255|HAMAP-Rule:MF_00054};; species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
Displaying 6 items

View Taxonomy