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PLM4_90_coex_sep16_scaffold_1284

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1284_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2..1417
DNA (1416bp) protein (472aa)
Endonuclease V Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T3B2_9EURY
methylated-DNA/protein-cysteine methyltransferase
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM4_90_coex_sep16_scaffold_1284_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1659..2609
DNA (951bp) protein (317aa)
Cation diffusion facilitator family transporter Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3A0_DEHLB
cation diffusion facilitator family transporter
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PLM4_90_coex_sep16_scaffold_1284_3
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(2636..3637)
DNA (1002bp) protein (334aa)
Type II secretion system protein E Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFF3_ACIB4
type II secretion system protein E
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PLM4_90_coex_sep16_scaffold_1284_4
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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3812..4609
DNA (798bp) protein (266aa)
Type I phosphodiesterase/nucleotide pyrophosphatase bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM4_90_coex_sep16_scaffold_1284_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4778..5299
DNA (522bp) protein (174aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WQ4_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM4_90_coex_sep16_scaffold_1284_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5415..5771
DNA (357bp) protein (119aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM4_90_coex_sep16_scaffold_1284_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5791..6390
DNA (600bp) protein (200aa)
transmembrane_regions 7..29 bin=bin11_novelCP species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=bin11_novelCP organism_group=Unknown_CP
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM4_90_coex_sep16_scaffold_1284_8
unknown

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6392..6727
DNA (336bp) protein (112aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_1284_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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6724..7632
DNA (909bp) protein (303aa)
Putative uncharacterized protein Tax=uncultured candidate division OP1 bacterium RepID=H5SUZ0_9BACT bin=RBG9 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
cytochrome c biogenesis transmembrane protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM4_90_coex_sep16_scaffold_1284_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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7718..8350
DNA (633bp) protein (211aa)
seg 33..60 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM4_90_coex_sep16_scaffold_1284_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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8465..9412
DNA (948bp) protein (316aa)
GCN5-related N-acetyltransferase domain protein (Fragment) Tax=mine drainage metagenome RepID=T0YFY3_9ZZZZ
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_90_coex_sep16_scaffold_1284_12
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9515..9709)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 7375 RepID=K9ESR5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKU99658.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
PLM4_90_coex_sep16_scaffold_1284_13
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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comp(9769..10086)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Pleurocapsa sp. PCC 7327 RepID=K9SY07_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY75522.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
PLM4_90_coex_sep16_scaffold_1284_14
unknown

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comp(10112..10576)
DNA (465bp) protein (155aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_1284_15
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10984..13674
DNA (2691bp) protein (897aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
Multi-sensor signal transduction histidine kinase Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VR37_9CYAN
multi-sensor signal transduction histidine kinase
PLM4_90_coex_sep16_scaffold_1284_16
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13676..14125
DNA (450bp) protein (150aa)
Response regulator, receiver Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNG8_MYXFH
response regulator, receiver
Response regulator, receiver {ECO:0000313|EMBL:AEI62885.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM4_90_coex_sep16_scaffold_1284_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14130..14567
DNA (438bp) protein (146aa)
Two-component system response regulator Tax=Cystobacter fuscus DSM 2262 RepID=S9PAV0_9DELT
Two-component system response regulator {ECO:0000313|EMBL:EPX60231.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
response regulator, receiver
PLM4_90_coex_sep16_scaffold_1284_18
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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14572..14829
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EN77_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF86140.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
response regulator receiver protein
Displaying 18 items

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