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PLM3-1_170_b2_sep16_scaffold_2162

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2162_1
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3..356)
DNA (354bp) protein (118aa)
Deoxyhypusine synthase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2B3_NITMS
deoxyhypusine synthase-like protein
Deoxyhypusine synthase {ECO:0000313|EMBL:ABX12824.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM3-1_170_b2_sep16_scaffold_2162_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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472..2322
DNA (1851bp) protein (617aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
threonyl-tRNA ligase (EC:6.1.1.3)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_2162_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2592..3458)
DNA (867bp) protein (289aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] bin=bin2_Thaum tax=bin2_Thaum organism_group=Archaeon
agmatinase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_2162_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3769..4041)
DNA (273bp) protein (91aa)
DNA polymerase I; K02319 DNA polymerase I [EC:2.7.7.7] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA polymerase family B, exonuclease domain protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_2162_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4042..6333)
DNA (2292bp) protein (764aa)
DNA polymerase I; K02319 DNA polymerase I [EC:2.7.7.7] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA polymerase I
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_2162_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(6343..6873)
DNA (531bp) protein (177aa)
CMP/dCMP deaminase zinc-binding Tax=Thaumarchaeota archaeon N4 RepID=V6AT75_9ARCH
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:CDI05720.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Cytidine and deoxycytidylate deaminase zinc-binding region
PLM3-1_170_b2_sep16_scaffold_2162_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6947..8449
DNA (1503bp) protein (501aa)
DEAD/DEAH box helicase; K10896 fanconi anemia group M protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase domain protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_2162_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(8451..8735)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ASM8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05716.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2162_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(8850..9590)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06359.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Putative phage head-tail adaptor (modular protein)
PLM3-1_170_b2_sep16_scaffold_2162_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9691..10218
DNA (528bp) protein (176aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CH0_SOLUE
type VI secretion system effector, Hcp1 family
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:AIF82945.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_2162_11
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10247..10888
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KKT1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG42090.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
conserved exported protein of unknown function
PLM3-1_170_b2_sep16_scaffold_2162_12

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10910..11164
DNA (255bp) protein (85aa)
Transcriptional regulator, AsnC family Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D328_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK88361.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_2162_13
unknown

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comp(11431..11844)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2162_14
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11894..14914)
DNA (3021bp) protein (1007aa)
Outer membrane autotransporter barrel domain Tax=Maricaulis maris (strain MCS10) RepID=Q0AKY0_MARMM
outer membrane autotransporter
Tax=GWE2_Bacteroidetes_32_14_curated
PLM3-1_170_b2_sep16_scaffold_2162_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(15043..15747)
DNA (705bp) protein (235aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5V162_ROSS1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3-1_170_b2_sep16_scaffold_2162_16
unknown

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comp(15966..16211)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 16 items

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