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PLM3-1_170_b2_sep16_scaffold_716

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_716_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..900
DNA (900bp) protein (300aa)
asnB1; asparagine synthase (EC:6.3.5.4)
Putative asparagine synthase {ECO:0000313|EMBL:AFU57531.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AFU57531.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative asparagine synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8C8_NITGG
PLM3-1_170_b2_sep16_scaffold_716_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(949..1797)
DNA (849bp) protein (283aa)
Putative glycosyl transferase, family 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHY3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15092.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_716_3

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comp(1983..2456)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EKR9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFM14538.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D11.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_716_4
unknown

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2735..3628
DNA (894bp) protein (298aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_716_5

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3677..4459
DNA (783bp) protein (261aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000376A3DC
Uncharacterized protein {ECO:0000313|EMBL:AIF12864.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_57_F01.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_716_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4456..5514
DNA (1059bp) protein (353aa)
mtnA; S-methyl-5-thioribose-1-phosphate isomerase (EC:5.3.1.23)
aIF-2BI family translation initiation factor bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_7

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5548..6177
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLF0_9ARCH
Putative metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:AIF09606.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_38_E02.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_716_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6193..6498)
DNA (306bp) protein (102aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_9
unknown

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6529..6849
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_716_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6900..7493
DNA (594bp) protein (198aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved membrane protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7457..7951)
DNA (495bp) protein (165aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_trna_2
unknown

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comp(8006..8080)
DNA (75bp)
transferRNA Arg
PLM3-1_170_b2_sep16_scaffold_716_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8151..9296
DNA (1146bp) protein (382aa)
alanine aminotransferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Alanine aminotransferase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_13

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comp(9293..9688)
DNA (396bp) protein (132aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1V3_NITMS
Uncharacterized protein {ECO:0000313|EMBL:KKL59185.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
PLM3-1_170_b2_sep16_scaffold_716_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9675..9908)
DNA (234bp) protein (78aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9934..10605)
DNA (672bp) protein (224aa)
coenzyme F420-dependent NADP oxidoreductase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
coenzyme F420-dependent NADP oxidoreductase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_16

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10666..11280
DNA (615bp) protein (205aa)
Phosphoglycerate mutase (GpmB) {ECO:0000313|EMBL:AIF03747.1}; EC=5.4.2.- {ECO:0000313|EMBL:AIF03747.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_169_D08.;"
Putative phosphoglycerate mutase family protein Tax=uncultured marine crenarchaeote HF4000_ANIW133M9 RepID=B3T477_9ARCH
phosphoglycerate mutase
PLM3-1_170_b2_sep16_scaffold_716_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11333..12331
DNA (999bp) protein (333aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_18
uncultured marine crenarchaeote HF4000_ANIW141N1, Nitrosopumilales, Thaumarchaeota, Archaea

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12363..16592
DNA (4230bp) protein (1410aa)
Putative Subtilase family protein Tax=uncultured marine crenarchaeote HF4000_ANIW141N1 RepID=B3T626_9ARCH
Putative Subtilase family protein {ECO:0000313|EMBL:ABZ08035.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW141N1.;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM3-1_170_b2_sep16_scaffold_716_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16633..17244
DNA (612bp) protein (204aa)
rieske iron sulfur protein; K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rieske iron sulfur protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_20
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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17222..18790
DNA (1569bp) protein (523aa)
Cytochrome b/b6 domain-containing protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYL5_9ARCH
Cytochrome b/b6 domain-containing protein {ECO:0000313|EMBL:EGP94409.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
cytochrome B(C-terminal)/b6/PetD
PLM3-1_170_b2_sep16_scaffold_716_21
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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18855..19325
DNA (471bp) protein (157aa)
Copper binding protein, plastocyanin/azurin family Tax=Thaumarchaeota archaeon N4 RepID=V6AUU0_9ARCH
Copper binding protein, plastocyanin/azurin family {ECO:0000313|EMBL:CDI06300.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Blue (Type 1) copper domain protein
PLM3-1_170_b2_sep16_scaffold_716_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19322..19672)
DNA (351bp) protein (117aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_716_trna_1
unknown

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comp(19719..19793)
DNA (75bp)
transferRNA Arg
Displaying 24 items

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