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PLM3-1_170_b2_sep16_scaffold_1756

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1756_1
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2..337)
DNA (336bp) protein (112aa)
Glucose-6-phosphate isomerase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYC2_9ARCH
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:EGP92900.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
glucose-6-phosphate isomerase
PLM3-1_170_b2_sep16_scaffold_1756_2
unknown

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comp(697..849)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1756_3
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(1077..1259)
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I995_NITGG
putative transcription regulator AbrB/SpoV
Tax=RBG_16_Micrarchaeota_49_10_curated
PLM3-1_170_b2_sep16_scaffold_1756_4

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1415..1666
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUU3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KEQ56862.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-N04.;"
PLM3-1_170_b2_sep16_scaffold_1756_5

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1663..2064
DNA (402bp) protein (134aa)
Putative PilT protein domain protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUV5_9ARCH
PilT protein domain containing protein {ECO:0000313|EMBL:KEQ56861.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-N04.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1756_6
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

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comp(2213..2434)
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Ferroplasma sp. Type II RepID=T0NJH9_9EURY
Tax=Altiarchaeum hamiconexum
PLM3-1_170_b2_sep16_scaffold_1756_7
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(2670..2900)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KFM17892.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1756_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3070..4386)
DNA (1317bp) protein (439aa)
Bacteriocin biosynthesis cyclodehydratase, SagC family (EC:6.3.-.-)
Putative ThiF family protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUU2_9ARCH
Putative ThiF family protein {ECO:0000313|EMBL:CDI06310.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_1756_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(4387..5604)
DNA (1218bp) protein (406aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Threonine synthase Tax=Thaumarchaeota archaeon N4 RepID=V6AU70_9ARCH
threonine synthase
PLM3-1_170_b2_sep16_scaffold_1756_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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5839..6330
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUW1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06312.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1756_11
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6333..6665)
DNA (333bp) protein (111aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
hisI; Phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KNH3_9ARCH
PLM3-1_170_b2_sep16_scaffold_1756_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6701..7504)
DNA (804bp) protein (268aa)
Imidazole glycerol phosphate synthase cyclase subunit bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hisF; imidazoleglycerol phosphate synthase, cyclase subunit
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1756_13

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comp(7501..8208)
DNA (708bp) protein (236aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
Uncharacterized protein {ECO:0000313|EMBL:KKL04336.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_1756_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8205..8810)
DNA (606bp) protein (202aa)
hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1756_15
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8810..9397)
DNA (588bp) protein (196aa)
hisB; Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000313|EMBL:AJM91311.1}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000313|EMBL:AJM91311.1};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
imidazoleglycerol-phosphate dehydratase Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000363B2E3
PLM3-1_170_b2_sep16_scaffold_1756_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9422..10405)
DNA (984bp) protein (328aa)
hydrolase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hydrolase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1756_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10402..11472)
DNA (1071bp) protein (357aa)
class I/II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
class I/II aminotransferase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1756_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11469..12752)
DNA (1284bp) protein (428aa)
hisD; Histidinol dehydrogenase (EC:1.1.1.23)
histidinol dehydrogenase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1756_19

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comp(12752..13729)
DNA (978bp) protein (326aa)
ATP phosphoribosyltransferase (HisG) {ECO:0000313|EMBL:AIF08494.1}; EC=2.4.2.17 {ECO:0000313|EMBL:AIF08494.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_31_D02.;"
ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_1756_20
unknown

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comp(13770..13844)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 20 items

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