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PLM3-1_170_b2_sep16_scaffold_1910

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1910_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3..266)
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATA9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05887.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_1910_2
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(362..760)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KIM3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJM92717.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3-1_170_b2_sep16_scaffold_1910_3
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1175..2866
DNA (1692bp) protein (564aa)
Adenylate/guanylate cyclase with integral membrane sensor Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUI0_9ARCH
Adenylate/guanylate cyclase with integral membrane sensor {ECO:0000313|EMBL:EGP94614.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Adenylate/guanylate cyclase with integral membrane sensor
PLM3-1_170_b2_sep16_scaffold_1910_4

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2909..3595
DNA (687bp) protein (229aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ74_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AIF15305.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_70_B05.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3844..4224)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ASM3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05448.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_1910_6
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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4300..4689
DNA (390bp) protein (130aa)
Putative transcription regulator Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX50_9ARCH
hypothetical protein
Putative transcription regulator {ECO:0000313|EMBL:EGP93852.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
PLM3-1_170_b2_sep16_scaffold_1910_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4698..4913)
DNA (216bp) protein (72aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1910_8
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5023..5646)
DNA (624bp) protein (208aa)
sodA; Mn superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
Superoxide dismutase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMF7_9ARCH
PLM3-1_170_b2_sep16_scaffold_1910_9

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comp(5955..6350)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKL6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24876.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6454..6729
DNA (276bp) protein (92aa)
Uncharacterized protein bin=bin2_Thaum species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1910_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6833..7219
DNA (387bp) protein (129aa)
putative hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Putative hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:AIC14191.1}; EC=3.1.2.6 {ECO:0000313|EMBL:AIC14191.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
UPI0003D64D95 related cluster Tax=unknown RepID=UPI0003D64D95
PLM3-1_170_b2_sep16_scaffold_1910_12
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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7257..7505
DNA (249bp) protein (83aa)
AsnC family transcription regulator Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KNE4_9ARCH
AsnC family transcription regulator {ECO:0000313|EMBL:EGG41120.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
AsnC family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_1910_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(7502..8104)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATK6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05977.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8236..8442)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E7T2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06788.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

8798..9010
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AU62_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05978.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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9073..9579
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ASF6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05519.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b2_sep16_scaffold_1910_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9690..10100)
DNA (411bp) protein (137aa)
Cupredoxin domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMP0_NITGG
plastocyanin
Plastocyanin {ECO:0000313|EMBL:AIF85562.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_1910_18
AR4, Woesearchaeaota, DPANN, Archaea

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10174..10962
DNA (789bp) protein (263aa)
PBP family phospholipid-binding protein; K06910 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Phospholipid-binding protein
Tax=AR4
PLM3-1_170_b2_sep16_scaffold_1910_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11085..11561)
DNA (477bp) protein (159aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1910_20
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(11637..12596)
DNA (960bp) protein (320aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AVM3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06620.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(12637..12888)
DNA (252bp) protein (84aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1910_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13012..13356
DNA (345bp) protein (115aa)
Putative nitrogen regulatory protein P-II Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8W4_NITGG
nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AFU57681.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1910_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13389..14756)
DNA (1368bp) protein (456aa)
gabD; succinate-semialdehyde dehydrogenase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
gabD; succinate-semialdehyde dehydrogenase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1910_24
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

14848..15273
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AQP3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05061.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_25
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

15424..15792
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AV93_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06398.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1910_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(15936..16343)
DNA (408bp) protein (136aa)
Flavin nucleotide binding protein Tax=Thaumarchaeota archaeon N4 RepID=V6AV54_9ARCH
Flavin nucleotide binding protein {ECO:0000313|EMBL:CDI06427.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
flavin nucleotide binding protein
PLM3-1_170_b2_sep16_scaffold_1910_27
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(16404..16805)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYR9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW69989.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b2_sep16_scaffold_1910_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16894..17265
DNA (372bp) protein (124aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1910_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17296..17646)
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEG2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83728.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_1910_30
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17810..18154
DNA (345bp) protein (115aa)
Putative nitrogen regulatory protein P-II Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8W4_NITGG
nitrogen regulatory protein P-II family
Nitrogen regulatory protein P-II family {ECO:0000313|EMBL:AIF84771.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying 30 items

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