ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1170_20

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: 10654..11175

Top 3 Functional Annotations

Value Algorithm Source
rpl5p; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 173.0
  • Bit_score: 247
  • Evalue 6.00e-63
rpl; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 173.0
  • Bit_score: 243
  • Evalue 4.20e-62
Tax=CSP1_1_Thaumarchaeota similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 173.0
  • Bit_score: 247
  • Evalue 8.50e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 522
ATGTCGCAGAAACTTGAAAACCAGATGAAGAAAATTTCAATTGCCAAAGTAGTCCTAAACATGGGGGTTGGAAAATCTGGCGAACCAATTGAACAAGCAAAACGTGCTTTAGAACAGATCGCTGGGCAAAAACCAAACTCACGCAATGCTAAAGCTACTCAAAGAGACTGGGGAGTTCATAAAGGTGAACCAATAGGTGTCGCTGTAACCCTTAGAAGACAACCTGCAATAGAACTTATCAAAAGACTCTTTATTGCAAAAGGAAATCAGATGAAAGGCTCTTCATTTGACGATTTTGGAAACCTGTCATTTGGAATAAAAGAATACATAGACATTCCTGGAGTAAAATATGATCCTCAAATTGGCATTTTGGGATTAAATGTTTCAATTTCATTGACAAGACCAGGTTTTAACATTAGATTTAGGAGCAAACACAAAGCAAGTGTAGGCAATCATCATAGAATTACAAGCGAAGATGCAAAGGCATTTCTAACGAAAGAATTTGGAATAGAGATAGTGTAA
PROTEIN sequence
Length: 174
MSQKLENQMKKISIAKVVLNMGVGKSGEPIEQAKRALEQIAGQKPNSRNAKATQRDWGVHKGEPIGVAVTLRRQPAIELIKRLFIAKGNQMKGSSFDDFGNLSFGIKEYIDIPGVKYDPQIGILGLNVSISLTRPGFNIRFRSKHKASVGNHHRITSEDAKAFLTKEFGIEIV*