ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1614

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1614_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2..529)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHH3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59375.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1614_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(510..923)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59374.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1614_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1212..1496
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL92_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59372.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1614_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1498..1662)
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83319.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_1614_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1720..2004)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59370.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1614_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2044..2547)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59369.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1614_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3006..3479
DNA (474bp) protein (158aa)
Putative transcriptional regulator, AsnC family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJJ8_NITGG
putative transcriptional regulator, AsnC family
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIC17273.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1614_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3536..3712
DNA (177bp) protein (59aa)
secE; protein translocase SecE subunit
Protein translocase SecE subunit {ECO:0000313|EMBL:AIC17276.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b2_sep16_scaffold_1614_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3755..4102
DNA (348bp) protein (116aa)
Thioredoxin Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID95_NITGG
trxA2; thioredoxin
Thioredoxin {ECO:0000313|EMBL:AFU59366.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1614_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


4255..6906
DNA (2652bp) protein (884aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF9_NITGG
PLM3-1_170_b2_sep16_scaffold_1614_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


6916..9813
DNA (2898bp) protein (966aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH1_NITGG
PLM3-1_170_b2_sep16_scaffold_1614_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9847..10029)
DNA (183bp) protein (61aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83356.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_1614_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10131..11153
DNA (1023bp) protein (341aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL82_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59362.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1614_14
unknown

Not on your lists

11176..11586
DNA (411bp) protein (137aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1614_15
unknown

Not on your lists

11648..11854
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 15 items

View Taxonomy