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PLM3-1_170_b2_sep16_scaffold_1706

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1706_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(46..432)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGN3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57993.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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675..1307
-----------------
DNA (633bp)
protein (211aa)
Putative translin family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9G3_NITGG
putative RNA-binding protein of the translin family
Putative translin family protein {ECO:0000313|EMBL:AIC15458.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_1706_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1349..1552
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILK4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60478.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1553..2992)
-----------------
DNA (1440bp)
protein (480aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP44_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60479.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3026..3898)
-----------------
DNA (873bp)
protein (291aa)
Putative cobyrinic acid a,c-diamide synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK24_NITGG
cobyrinic acid a,c-diamide synthase
Putative cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:AFU60480.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3999..4361
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE03_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57990.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4426..4749
-----------------
DNA (324bp)
protein (108aa)
TatA subunit of twin-arginine targeting system Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIU3_NITGG
tatA1; TatA subunit of twin-arginine targeting system
TatA subunit of twin-arginine targeting system {ECO:0000313|EMBL:AFU58037.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4769..6106
-----------------
DNA (1338bp)
protein (446aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGR8_NITGG
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6171..6521)
-----------------
DNA (351bp)
protein (117aa)
Fe-S cluster assembly protein sufA Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN0_NITGG
sufA; Fe-S cluster assembly protein sufA
Fe-S cluster assembly protein sufA {ECO:0000313|EMBL:AFU58039.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6566..7309)
-----------------
DNA (744bp)
protein (248aa)
Peptidyl-prolyl cis-trans isomerase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE41_NITGG
FKBP-type peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7372..8553)
-----------------
DNA (1182bp)
protein (394aa)
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9P6_NITGG
aminotransferase OR putativesoluble hydrogenase, small subunit
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit {ECO:0000313|EMBL:AFU58041.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8623..9690
-----------------
DNA (1068bp)
protein (356aa)
pepQ; creatinase (EC:3.4.13.9 3.5.3.3)
Putative creatinase {ECO:0000313|EMBL:AFU58043.1}; EC=3.4.13.9 {ECO:0000313|EMBL:AFU58043.1};; EC=3.5.3.3 {ECO:0000313|EMBL:AFU58043.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative creatinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS1_NITGG
PLM3-1_170_b2_sep16_scaffold_1706_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9740..11002)
-----------------
DNA (1263bp)
protein (421aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein coaBC {ECO:0000313|EMBL:AFU58045.1}; EC=4.1.1.36 {ECO:0000313|EMBL:AFU58045.1};; EC=6.3.2.5 {ECO:0000313|EMBL:AFU58045.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Coenzyme A biosynthesis bifunctional protein coaBC Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE45_NITGG
PLM3-1_170_b2_sep16_scaffold_1706_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10999..11526)
-----------------
DNA (528bp)
protein (176aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9Q1_NITGG
PLM3-1_170_b2_sep16_scaffold_1706_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11474..11749)
-----------------
DNA (276bp)
protein (92aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9Q1_NITGG
PLM3-1_170_b2_sep16_scaffold_1706_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11749..12495)
-----------------
DNA (747bp)
protein (249aa)
Putative pantothenate synthetase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIV1_NITGG
pantothenate synthetase
Putative pantothenate synthetase {ECO:0000313|EMBL:AFU58047.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12499..13419)
-----------------
DNA (921bp)
protein (307aa)
Putative GHMP kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS5_NITGG
GHMP kinase
Putative GHMP kinase {ECO:0000313|EMBL:AFU58048.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13493..14506
-----------------
DNA (1014bp)
protein (338aa)
Putative PhoU family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN4_NITGG
PhoU family protein
Putative PhoU family protein {ECO:0000313|EMBL:AFU58049.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_19
uncultured crenarchaeote, Crenarchaeota, Archaea

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14532..15491
-----------------
DNA (960bp)
protein (320aa)
Putative transmembrane protein Tax=uncultured crenarchaeote RepID=Q8NKM7_9CREN
Putative transmembrane protein {ECO:0000313|EMBL:CAD42693.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
putative esterase of the alpha-beta hydrolase superfamily
PLM3-1_170_b2_sep16_scaffold_1706_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15457..15696
-----------------
DNA (240bp)
protein (80aa)
Putative pyridine nucleotide-disulfide oxidoreductase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIV4_NITGG
pyridine nucleotide-disulfide oxidoreductase family protein
Putative pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:AFU58052.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15693..16670)
-----------------
DNA (978bp)
protein (326aa)
mvk; mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase {ECO:0000313|EMBL:AFU58053.1}; EC=2.7.1.36 {ECO:0000313|EMBL:AFU58053.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Mevalonate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGT0_NITGG
PLM3-1_170_b2_sep16_scaffold_1706_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(16667..17527)
-----------------
DNA (861bp)
protein (287aa)
MEMO1 family protein Ngar_c11120 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN6_NITGG
hypothetical protein
MEMO1 family protein Ngar_c11120 {ECO:0000256|HAMAP-Rule:MF_00055}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(17524..18222)
-----------------
DNA (699bp)
protein (233aa)
30S ribosomal protein S2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IE52_NITGG
rps2p; 30S ribosomal protein S2p
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18226..19476)
-----------------
DNA (1251bp)
protein (417aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Enolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE56_NITGG
PLM3-1_170_b2_sep16_scaffold_1706_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(19532..19768)
-----------------
DNA (237bp)
protein (79aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA-directed RNA polymerase subunit N Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9R1_NITGG
rpoN; DNA-directed RNA polymerase, subunit N
PLM3-1_170_b2_sep16_scaffold_1706_trna_1
unknown

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19858..19942
-----------------
DNA (85bp)
transferRNA Leu
PLM3-1_170_b2_sep16_scaffold_1706_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19874..20620
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMP5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58079.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21018..21518)
-----------------
DNA (501bp)
protein (167aa)
Alkyl hydroperoxide reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9T1_NITGG
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AFU58081.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1706_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21549..22139)
-----------------
DNA (591bp)
protein (197aa)
Putative cytochrome c biogenesis protein, transmembrane region Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW2_NITGG
cytochrome c biogenesis protein, transmembrane region
Putative cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:AFU58083.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 29 items

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