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PLM3-1_170_b2_sep16_scaffold_1719

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1719_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..1270)
DNA (1269bp) protein (423aa)
Putative gas vesicle protein GvpD Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL09_NITGG
gvpD; gas vesicle protein GvpD
Putative gas vesicle protein GvpD {ECO:0000313|EMBL:AFU59242.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1432..1806
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICZ4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59241.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1764..2048
DNA (285bp) protein (95aa)
50S ribosomal protein L32e Tax=Candidatus Nitrososphaera gargensis RepID=K0IH73_NITGG
rpl32e; 50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2048..2494
DNA (447bp) protein (149aa)
50S ribosomal protein L19e Tax=Candidatus Nitrososphaera gargensis RepID=K0INE6_NITGG
rpl19e; 50S ribosomal protein L19e
R-protein L19e {ECO:0000313|EMBL:ADK26036.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_1719_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2491..2817)
DNA (327bp) protein (109aa)
Putative methylated-DNA--protein-cysteine methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD6_NITGG
methylated-DNA--protein-cysteine methyltransferase
Putative methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:AFU59238.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2848..3675)
DNA (828bp) protein (276aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative D-tyrosyl-tRNA(Tyr) deacylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
PLM3-1_170_b2_sep16_scaffold_1719_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3686..4447
DNA (762bp) protein (254aa)
Transcription elongation factor Spt5 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH71_NITGG
nusG; transcription antitermination protein NusG
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4517..5194
DNA (678bp) protein (226aa)
Putative siroheme synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE5_NITGG
siroheme synthase
Putative siroheme synthase {ECO:0000313|EMBL:AFU59234.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5191..6507
DNA (1317bp) protein (439aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glutamyl-tRNA reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD3_NITGG
PLM3-1_170_b2_sep16_scaffold_1719_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6476..7489
DNA (1014bp) protein (338aa)
hemB1; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Delta-aminolevulinic acid dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKZ6_NITGG
PLM3-1_170_b2_sep16_scaffold_1719_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7522..8151
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICY7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59231.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_trna_1
unknown

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8197..8271
DNA (75bp)
transferRNA Gly
PLM3-1_170_b2_sep16_scaffold_1719_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8276..8488)
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH69_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59230.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8650..8862)
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59229.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8865..9314)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59228.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_15
unknown

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comp(9639..9935)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1719_16
unknown

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10084..10311
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1719_17
unknown

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comp(10368..10721)
DNA (354bp) protein (118aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1719_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10819..11355
DNA (537bp) protein (179aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INI0_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU59409.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11358..12494)
DNA (1137bp) protein (379aa)
Putative signal transduction histidine kinase, with PAS, phosphoacceptor and ATP binding domain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJM5_NITGG
signal transduction histidine kinase, with PAS, phosphoacceptor and ATP binding domain
Putative signal transduction histidine kinase, with PAS, phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU59408.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12624..12956
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILB3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59407.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_1719_21
unknown

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12953..13021
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 22 items

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