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PLM3-1_170_b2_sep16_scaffold_2594

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2594_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(111..398)
DNA (288bp) protein (96aa)
Uncharacterized protein family UPF0434/Trm112 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD1_NITGG
hypothetical protein
UPF0434 protein Ngar_c21050 {ECO:0000256|HAMAP-Rule:MF_01187}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(430..921)
DNA (492bp) protein (164aa)
Putative oxidoreductase domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKM1_NITGG
oxidoreductase domain-containing protein
Putative oxidoreductase domain protein {ECO:0000313|EMBL:AFU59037.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(905..1438)
DNA (534bp) protein (178aa)
Putative oxidoreductase domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKM1_NITGG
putative oxidoreductase domain protein
Putative oxidoreductase domain protein {ECO:0000313|EMBL:AIC14978.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_2594_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1417..2334)
DNA (918bp) protein (306aa)
ilvE1; branched-chain amino-acid aminotransferase (EC:2.6.1.42)
Branched-chain amino-acid aminotransferase {ECO:0000313|EMBL:AFU59038.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AFU59038.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Branched-chain amino-acid aminotransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIX0_NITGG
PLM3-1_170_b2_sep16_scaffold_2594_5
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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comp(2392..2664)
DNA (273bp) protein (91aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG3H9 RepID=B3T7Q3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA92117.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
PLM3-1_170_b2_sep16_scaffold_2594_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3003..3260)
DNA (258bp) protein (86aa)
DNA/RNA-binding protein Alba Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIX5_NITGG
albA; DNA/RNA-binding protein Alba
DNA/RNA-binding protein Alba {ECO:0000256|HAMAP-Rule:MF_01122}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3438..3950
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK47_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59603.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_8
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4594..5115)
DNA (522bp) protein (174aa)
hypothetical protein Tax=Oscillatoria formosa RepID=UPI00037EA923
Pentapeptide repeats family protein {ECO:0000313|EMBL:EYT32322.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 1195185_11.;"
pentapeptide repeats family protein
PLM3-1_170_b2_sep16_scaffold_2594_9
unknown

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6400..6582
DNA (183bp) protein (61aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2594_10
unknown

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comp(7226..7564)
DNA (339bp) protein (113aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2594_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7579..7881)
DNA (303bp) protein (101aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14964.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_2594_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8021..9064)
DNA (1044bp) protein (348aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83197.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_2594_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9217..9471
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGF4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60476.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9540..9953)
DNA (414bp) protein (138aa)
Putative glyoxalase/bleomycin resistance protein/dioxygenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMP1_NITGG
glyoxalase/bleomycin resistance protein/dioxygenase
Putative glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AFU60452.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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10092..10502
DNA (411bp) protein (137aa)
putative F420-dependent protein bin=bin1_lowGC species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
pyridoxamine 5'-phosphate oxidase-like protein
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b2_sep16_scaffold_2594_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10982..11290)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59499.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_17
unknown

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comp(11467..11922)
DNA (456bp) protein (152aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2594_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12044..13198)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037C6640
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIC16058.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_2594_19
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(13274..14329)
DNA (1056bp) protein (352aa)
putative adenylate/guanylate cyclase (EC:4.6.1.1)
Adenylate/guanylate cyclase catalytic domain protein Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1WB37_9LEPT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:KJU87029.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
PLM3-1_170_b2_sep16_scaffold_2594_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14697..15128)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHC8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83382.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_2594_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15228..15944
DNA (717bp) protein (239aa)
DedA family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0III1_NITGG
DedA family protein
DedA family protein {ECO:0000313|EMBL:AFU58853.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_2594_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16128..16715
DNA (588bp) protein (196aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82597.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_2594_23
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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comp(16723..17424)
DNA (702bp) protein (234aa)
Putative uncharacterized protein Tax=Dehalococcoides mccartyi RepID=D3SKA9_DEHSG
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG07001.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi DCMB5.;"
PLM3-1_170_b2_sep16_scaffold_2594_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17564..17785
DNA (222bp) protein (74aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83602.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_2594_25
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(18132..18761)
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=uncultured crenarchaeote RepID=Q701Y4_9CREN
Uncharacterized protein {ECO:0000313|EMBL:CAF28740.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
hypothetical protein
Displaying 25 items

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