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PLM3-1_170_b2_sep16_scaffold_8302

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_8302_1
unknown

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3..146
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_8302_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(195..791)
DNA (597bp) protein (199aa)
psmB2; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {ECO:0000256|HAMAP-Rule:MF_02113}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Proteasome subunit beta Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN23_NITGG
PLM3-1_170_b2_sep16_scaffold_8302_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(866..2485)
DNA (1620bp) protein (540aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II53_NITGG
hypothetical protein with ATP-binding domain
Uncharacterized protein {ECO:0000313|EMBL:AIC14729.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_8302_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2911..4023
DNA (1113bp) protein (371aa)
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA synthetase (ADP-forming) beta subunit {ECO:0000313|EMBL:AIF84091.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AIF84091.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Succinate--CoA ligase (ADP-forming) beta subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA1_NITGG
PLM3-1_170_b2_sep16_scaffold_8302_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4024..4938
DNA (915bp) protein (305aa)
sucD; succinyl-CoA ligase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase (ADP-forming) alpha subunit {ECO:0000313|EMBL:AIC14878.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AIC14878.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Succinate--CoA ligase (ADP-forming) alpha subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAX0_NITGG
PLM3-1_170_b2_sep16_scaffold_8302_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5210..5923
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58483.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_8302_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6168..6719
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83461.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_8302_8

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7001..7624
DNA (624bp) protein (208aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_88_E12.;"
gatE; glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA3_NITGG
Displaying 8 items

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