ggKbase home page

PLM3-1_170_b2_sep16_scaffold_8591

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_8591_1
unknown

Not on your lists

comp(1..231)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_8591_trna_1
unknown

Not on your lists

comp(400..507)
DNA (108bp)
transferRNA Ala
PLM3-1_170_b2_sep16_scaffold_8591_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1458..2018
DNA (561bp) protein (187aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHA0_NITGG
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AFU59285.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_8591_3
uncultured crenarchaeote 76h13, Crenarchaeota, Archaea

Not on your lists

2102..2485
DNA (384bp) protein (128aa)
Ferredoxin Tax=uncultured crenarchaeote 76h13 RepID=D4N753_9CREN
Ferredoxin {ECO:0000313|EMBL:ACY24539.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 76h13.;"
ferredoxin
PLM3-1_170_b2_sep16_scaffold_8591_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2591..4033
DNA (1443bp) protein (481aa)
Glycosyl transferase family 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE3_NITGG
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFU59224.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_8591_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4107..5159)
DNA (1053bp) protein (351aa)
top6A; Topoisomerase IIB, subunitA (EC:5.99.1.3)
Topoisomerase IIB, subunitA {ECO:0000313|EMBL:AIC17107.1}; EC=5.99.1.3 {ECO:0000313|EMBL:AIC17107.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Type 2 DNA topoisomerase 6, subunit A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM18_NITGG
PLM3-1_170_b2_sep16_scaffold_8591_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5228..7141)
DNA (1914bp) protein (638aa)
top6B; putative topoisomerase IIB, subunitB (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Type 2 DNA topoisomerase 6 subunit B Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEW2_NITGG
PLM3-1_170_b2_sep16_scaffold_8591_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7221..7376)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIV0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59895.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_8591_8
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7489..8271
DNA (783bp) protein (261aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Tyrosine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX0_NITGG
Displaying 9 items

View Taxonomy