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PLM3-1_170_b2_sep16_scaffold_17850

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_17850_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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3..347
DNA (345bp) protein (115aa)
metK; methionine adenosyltransferase (EC:2.5.1.6)
Methionine adenosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK97_NITGG
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3-1_170_b2_sep16_scaffold_17850_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(383..934)
DNA (552bp) protein (184aa)
Putative serine/threonine kinase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYL5_METPS
putative serine/threonine kinase
Tax=RBG_16_Thaumarchaeota_49_8_curated
PLM3-1_170_b2_sep16_scaffold_17850_3
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(879..1229)
DNA (351bp) protein (117aa)
Putative uncharacterized protein Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A8T7_METM6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX01760.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis (strain C6 / ATCC BAA-1332).;"
PLM3-1_170_b2_sep16_scaffold_17850_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1304..2056
DNA (753bp) protein (251aa)
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AIC14627.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AIC14627.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBT9_NITGG
PLM3-1_170_b2_sep16_scaffold_17850_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2069..3208
DNA (1140bp) protein (380aa)
cbiD; cobalt-precorrin-6A synthase (EC:2.1.1.-)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative cobalt-precorrin-6A synthase [deacetylating] Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG27_NITGG
PLM3-1_170_b2_sep16_scaffold_17850_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3232..3603)
DNA (372bp) protein (124aa)
Translation initiation factor 1A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM28_NITGG
eIF-1a1; Translation initiation factor 1A (IF-1)
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_17850_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3768..4103)
DNA (336bp) protein (112aa)
garR; putative 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Putative 2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AIC15468.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AIC15468.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
2-hydroxy-3-oxopropionate reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE26_NITGG
PLM3-1_170_b2_sep16_scaffold_17850_8

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comp(4237..4593)
DNA (357bp) protein (119aa)
2-hydroxy-3-oxopropionate reductase (MmsB) {ECO:0000313|EMBL:AIE90831.1}; EC=1.1.1.31 {ECO:0000313|EMBL:AIE90831.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_07_E11.;"
garR; putative 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVU0_9ARCH
PLM3-1_170_b2_sep16_scaffold_17850_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4846..6240
DNA (1395bp) protein (465aa)
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.16)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AIF83239.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AIF83239.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Aldehyde dehydrogenase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYT2_9ARCH
PLM3-1_170_b2_sep16_scaffold_17850_10
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6434..7054)
DNA (621bp) protein (207aa)
Secreted protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ92_9ARCH
Secreted protein
Secreted protein {ECO:0000313|EMBL:AJW71492.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b2_sep16_scaffold_17850_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7208..7438
DNA (231bp) protein (77aa)
Archaeal histone Tax=Candidatus Nitrososphaera gargensis RepID=K0INA0_NITGG
archaeal histone
Histone H3/H4-like protein {ECO:0000313|EMBL:ADK25985.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
Displaying 11 items

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