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PLM3-1_170_b2_sep16_scaffold_11761

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_11761_1
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4..480)
DNA (477bp) protein (159aa)
Putative short chain dehydrogenase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ67_9ARCH
Putative short chain dehydrogenase {ECO:0000313|EMBL:EGP94225.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
short-chain dehydrogenase of unknown substrate specificity
PLM3-1_170_b2_sep16_scaffold_11761_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(498..857)
DNA (360bp) protein (120aa)
short-chain dehydrogenase/reductase SDR bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
short-chain dehydrogenase of unknown substrate specificity
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_11761_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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972..1649
DNA (678bp) protein (226aa)
Putative pyridoxamine 5'-phosphate oxidase, FMN-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMU5_NITGG
putative pyridoxamine 5'-phosphate oxidase, FMN-binding
Putative pyridoxamine 5'-phosphate oxidase, FMN-binding {ECO:0000313|EMBL:AIC15281.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_11761_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1899..2429
DNA (531bp) protein (177aa)
Transcription factor E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDR9_NITGG
tfe; transcription factor E
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_11761_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2421..3071)
DNA (651bp) protein (217aa)
ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:AFU60177.1}; EC=1.1.1.193 {ECO:0000313|EMBL:AFU60177.1};; EC=3.5.4.26 {ECO:0000313|EMBL:AFU60177.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
5-amino-6-(5-phosphoribosylamino)uracil reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMD8_NITGG
PLM3-1_170_b2_sep16_scaffold_11761_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3072..4304)
DNA (1233bp) protein (411aa)
Putative amidohydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL67_NITGG
amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:AFU60178.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_11761_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4295..5083)
DNA (789bp) protein (263aa)
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
GTP cyclohydrolase III Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY4_NITGG
PLM3-1_170_b2_sep16_scaffold_11761_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5090..5530)
DNA (441bp) protein (147aa)
ribH; riboflavin synthase subunit beta (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
6,7-dimethyl-8-ribityllumazine synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJI9_NITGG
PLM3-1_170_b2_sep16_scaffold_11761_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5538..6005)
DNA (468bp) protein (156aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFQ1_NITGG
Displaying 9 items

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