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PLM3-1_170_b2_sep16_scaffold_22972

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_22972_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..403)
DNA (402bp) protein (134aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Cysteine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD9_NITGG
PLM3-1_170_b2_sep16_scaffold_22972_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(447..752)
DNA (306bp) protein (102aa)
Rieske (2Fe-2S) domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA5_NITGG
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AFU60142.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_170_b2_sep16_scaffold_22972_3
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(961..1152)
DNA (192bp) protein (64aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003636F60
Tax=RBG_16_Deltaproteobacteria_42_7_curated
PLM3-1_170_b2_sep16_scaffold_22972_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1152..2177)
DNA (1026bp) protein (342aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|RuleBase:RU000548};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Adenosylhomocysteinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX7_NITGG
PLM3-1_170_b2_sep16_scaffold_22972_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2336..3055
DNA (720bp) protein (240aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Methionine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE3_NITGG
PLM3-1_170_b2_sep16_scaffold_22972_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3114..3800
DNA (687bp) protein (229aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Methionine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE3_NITGG
Suspect SCG annotation. See neighboring gene [PLM3-1_170_b2_sep16_scaffold_22972_5].
Displaying 6 items

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