ggKbase home page

PLM3-1_170_b2_sep16_scaffold_24372

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_24372_1
unknown

Not on your lists

1..264
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_24372_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

763..1044
DNA (282bp) protein (94aa)
mdh; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Malate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC78_NITGG
PLM3-1_170_b2_sep16_scaffold_24372_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1074..1487
DNA (414bp) protein (138aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Malate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC78_NITGG
PLM3-1_170_b2_sep16_scaffold_24372_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1523..2308
DNA (786bp) protein (262aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003675091
putative 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
Putative 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:AIC15633.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_24372_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


2382..3023
DNA (642bp) protein (214aa)
R-protein L18p (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=E0A1H9_9ARCH
ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_24372_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


3020..3637
DNA (618bp) protein (206aa)
30S ribosomal protein S5p Tax=Candidatus Nitrososphaera gargensis RepID=K0IEB7_NITGG
SSU ribosomal protein S5P
SSU ribosomal protein S5P {ECO:0000313|EMBL:AIF84837.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_24372_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


3644..3841
DNA (198bp) protein (66aa)
50S ribosomal protein L30p Tax=Candidatus Nitrososphaera gargensis RepID=K0ILL3_NITGG
rpl30p; 50S ribosomal protein L30p
LSU ribosomal protein L30P {ECO:0000313|EMBL:AIF84836.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_170_b2_sep16_scaffold_24372_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


3796..4044
DNA (249bp) protein (83aa)
50S ribosomal protein L30p Tax=Candidatus Nitrososphaera gargensis RepID=K0ILL3_NITGG
rpl30p; 50S ribosomal protein L30p
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_170_b2_sep16_scaffold_24372_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


4116..4550
DNA (435bp) protein (145aa)
50S ribosomal protein L15p Tax=Candidatus Nitrososphaera gargensis RepID=K0IC83_NITGG
rpl15p; 50S ribosomal protein L15p
R-protein L15p {ECO:0000313|EMBL:ADK26032.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_24372_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4531..5652
DNA (1122bp) protein (374aa)
Protein translocase subunit SecY Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7B2_NITGG
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Displaying 10 items

View Taxonomy