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PLM1_100_b1_sep16_scaffold_566

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_566_1
unknown

Not on your lists

comp(1..621)
DNA (621bp) protein (207aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_566_trna_1
unknown

Not on your lists

725..808
DNA (84bp)
transferRNA Ser
PLM1_100_b1_sep16_scaffold_566_2
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(827..2251)
DNA (1425bp) protein (475aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
aconitate hydratase
Tax=GWA2_RIF03_38_11_curated
PLM1_100_b1_sep16_scaffold_566_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2808..3629
DNA (822bp) protein (274aa)
Putative Ras family protein Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
putative small GTP-binding protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3637..4017)
DNA (381bp) protein (127aa)
Protein of unknown function (DUF1684) bin=bin7_NC10_sister species=Halobiforma lacisalsi genus=Halobiforma taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4308..4622)
DNA (315bp) protein (105aa)
id=14627917 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4729..5361
DNA (633bp) protein (211aa)
Hypothetical conserved protein Tax=uncultured crenarchaeote RepID=H5SNR8_9CREN
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_trna_3
unknown

Not on your lists

comp(5388..5459)
DNA (72bp)
transferRNA Ala
PLM1_100_b1_sep16_scaffold_566_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5509..9111)
DNA (3603bp) protein (1201aa)
Putative cell-surface adhesin Tax=Acinetobacter baumannii RepID=E8PAL1_ACIB1
putative cell-surface adhesin
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9147..9461
DNA (315bp) protein (105aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9747..9959
DNA (213bp) protein (71aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_10
unknown

Not on your lists

10089..10289
DNA (201bp) protein (67aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_566_11
unknown

Not on your lists

10314..10445
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_566_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10692..10853
DNA (162bp) protein (54aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10908..11501
DNA (594bp) protein (198aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12123..12431
DNA (309bp) protein (103aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_15
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12447..12623
DNA (177bp) protein (59aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12663..12977
DNA (315bp) protein (105aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12996..13205
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_18
unknown

Not on your lists

13278..13625
DNA (348bp) protein (116aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_566_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13701..14921
DNA (1221bp) protein (407aa)
Cysteine--tRNA ligase Tax=Thermococcus sp. AM4 RepID=B7R1M2_9EURY
cysteinyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


14983..15369
DNA (387bp) protein (129aa)
30S ribosomal protein S6e Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK77_ACIS0
ribosomal protein S6E (S10)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


15443..16675
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DC8F0
translation initiation factor IF-2
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_22
unknown

Not on your lists

comp(16900..17067)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_566_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


17180..18217
DNA (1038bp) protein (346aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003662022
putative cell division protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM1_100_b1_sep16_scaffold_566_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18214..18786)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C5D1A
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_25
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

18878..20128
DNA (1251bp) protein (417aa)
Transposase, IS605 OrfB family Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L4I5_KORCO
IS605 family transposase OrfB
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PLM1_100_b1_sep16_scaffold_566_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20144..20521)
DNA (378bp) protein (126aa)
Peptidyl-tRNA hydrolase Tax=Thermococcus sp. CL1 RepID=I3ZS83_9EURY
peptidyl-tRNA hydrolase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20518..21120)
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK33_ACIS0
Protein of unknown function (DUF1616)
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM1_100_b1_sep16_scaffold_566_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

21243..21959
DNA (717bp) protein (239aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
circadian clock protein, KaiC
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying items 1-30 of 56 in total

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