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PLM3_30_b1_sep16_scaffold_84

Search features with annotation key words

Displaying items 31-48 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_84_31
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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30722..31585
DNA (864bp) protein (288aa)
citE; citrate/citryl-CoA lyase (EC:4.1.3.6 4.1.3.34)
Putative citrate/ citryl-CoA lyase {ECO:0000313|EMBL:AFU57075.1}; EC=4.1.3.34 {ECO:0000313|EMBL:AFU57075.1};; EC=4.1.3.6 {ECO:0000313|EMBL:AFU57075.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative citrate/ citryl-CoA lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBZ8_NITGG
PLM3_30_b1_sep16_scaffold_84_32
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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32016..32279
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7H2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82324.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_84_33
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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32446..32712
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFT1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16455.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_84_34
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(32745..33158)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATI6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16456.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_84_35
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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34656..35642
DNA (987bp) protein (329aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon Gpl RepID=T0LZ53_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69879.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.;"
Cl-channel, voltage-gated family protein
PLM3_30_b1_sep16_scaffold_84_36
unknown

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36084..36359
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_84_37
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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36662..37264
DNA (603bp) protein (201aa)
riboflavin synthase subunit alpha bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
riboflavin synthase subunit alpha
Tax=CSP1_1_Thaumarchaeota
PLM3_30_b1_sep16_scaffold_84_38
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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37321..38001
DNA (681bp) protein (227aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFQ1_NITGG
PLM3_30_b1_sep16_scaffold_84_39
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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38009..38449
DNA (441bp) protein (147aa)
ribH; riboflavin synthase subunit beta (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
6,7-dimethyl-8-ribityllumazine synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJI9_NITGG
PLM3_30_b1_sep16_scaffold_84_40
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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38456..39244
DNA (789bp) protein (263aa)
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
GTP cyclohydrolase III Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY4_NITGG
PLM3_30_b1_sep16_scaffold_84_41
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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39235..40467
DNA (1233bp) protein (411aa)
Putative amidohydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL67_NITGG
amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:AFU60178.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_84_42
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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40468..41118
DNA (651bp) protein (217aa)
ribD; 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:AFU60177.1}; EC=1.1.1.193 {ECO:0000313|EMBL:AFU60177.1};; EC=3.5.4.26 {ECO:0000313|EMBL:AFU60177.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
5-amino-6-(5-phosphoribosylamino)uracil reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMD8_NITGG
PLM3_30_b1_sep16_scaffold_84_43
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(41110..41640)
DNA (531bp) protein (177aa)
Transcription factor E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDR9_NITGG
tfe; transcription factor E
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_84_44
unknown

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comp(41649..41861)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_84_45
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(41913..42590)
DNA (678bp) protein (226aa)
Putative pyridoxamine 5'-phosphate oxidase Tax=uncultured archaeon RepID=I3RKH0_9ARCH
putative pyridoxamine 5'-phosphate oxidase, FMN-binding
Putative pyridoxamine 5'-phosphate oxidase, FMN-binding {ECO:0000313|EMBL:AIC15281.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_84_46
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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42706..43560
DNA (855bp) protein (285aa)
Putative short chain dehydrogenase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ67_9ARCH
short-chain dehydrogenase of unknown substrate specificity
Uncharacterized protein {ECO:0000313|EMBL:AIF85219.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_84_47
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(43579..44067)
DNA (489bp) protein (163aa)
Phosphoesterase PA-phosphatase related protein Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV58_9EURY
membrane-associated phospholipid phosphatase
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:AIF84466.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_84_48
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(44447..44929)
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon I-plasma RepID=T0LP14_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB65963.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
hypothetical protein
Displaying items 31-48 of 48 in total

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