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PLM3_30_b1_sep16_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_156_1
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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14..307
DNA (294bp) protein (98aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6Z6_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24482.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3_30_b1_sep16_scaffold_156_2
unknown

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comp(567..785)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_156_3

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comp(1180..2400)
DNA (1221bp) protein (407aa)
Serine protease Tax=uncultured organism RepID=D7GN83_9ZZZZ
Serine protease {ECO:0000313|EMBL:CBM43229.1}; Flags: Precursor;; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Putative lipoprotein (modular protein)
PLM3_30_b1_sep16_scaffold_156_trna_1
unknown

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comp(2805..2877)
DNA (73bp)
transferRNA Ala
PLM3_30_b1_sep16_scaffold_156_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3085..3507
DNA (423bp) protein (141aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
msrB; methionine sulfoxide reductase B (EC:1.8.4.11)
Tax=CSP1_1_Thaumarchaeota
PLM3_30_b1_sep16_scaffold_156_5
unknown

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comp(3535..3669)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_156_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4178..4480)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ23_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15121.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_156_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4624..5190)
DNA (567bp) protein (189aa)
Transcriptional regulator, ArsR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE2_NITGG
arsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFU57230.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_156_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5229..5504)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7K7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57231.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_156_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5924..8923)
DNA (3000bp) protein (1000aa)
Copper resistance family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG1_NITGG
putative copper export protein
Putative copper export protein {ECO:0000313|EMBL:AIF84887.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_156_10

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9040..9765
DNA (726bp) protein (242aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG6N3 RepID=B3T9D7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF05263.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_181_D10.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_156_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9804..10388
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEM6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15666.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_156_12
unknown

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comp(10849..11049)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_156_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11229..12128
DNA (900bp) protein (300aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84880.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_156_14
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12268..13407
DNA (1140bp) protein (380aa)
PKD domain containing protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GF92_METPE
Cell surface protein {ECO:0000313|EMBL:AKB43006.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_156_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13532..14083
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57229.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_156_16
unknown

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comp(14137..14496)
DNA (360bp) protein (120aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_156_17
unknown

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comp(14848..14979)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_156_18

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comp(15286..15759)
DNA (474bp) protein (158aa)
pyridoxamine 5'-phosphate oxidase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AIF00680.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_136_D12.;"
putative flavin-nucleotide-binding protein
PLM3_30_b1_sep16_scaffold_156_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16408..18039)
DNA (1632bp) protein (544aa)
ABC-1 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II14_NITGG
ABC-1 domain-containing protein
ABC-1 domain-containing protein {ECO:0000313|EMBL:AFU59565.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_156_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18144..18428)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDV7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83107.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_156_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18586..19176
DNA (591bp) protein (197aa)
DNA protection protein DPS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI4_NITGG
dps3; ferritin, Dps family protein
Ferritin, Dps family protein {ECO:0000313|EMBL:AIC16275.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_156_22
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19272..20528)
DNA (1257bp) protein (419aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
putative quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AIC14760.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_156_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21191..21874
DNA (684bp) protein (228aa)
Putative phosphoribosyl transferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW6_NITGG
putative phosphoribosyltransferase
Putative phosphoribosyltransferase {ECO:0000313|EMBL:AIF84509.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_156_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21927..23435)
DNA (1509bp) protein (503aa)
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000313|EMBL:AFU58102.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58102.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit N Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ0_NITGG
PLM3_30_b1_sep16_scaffold_156_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23450..25528)
DNA (2079bp) protein (693aa)
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:AFU58101.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58101.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit L Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U5_NITGG
PLM3_30_b1_sep16_scaffold_156_26
unknown

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comp(25525..25647)
DNA (123bp) protein (41aa)
PLM3_30_b1_sep16_scaffold_156_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25644..27365)
DNA (1722bp) protein (574aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:AFU58100.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58100.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit M Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE98_NITGG
PLM3_30_b1_sep16_scaffold_156_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27389..27691)
DNA (303bp) protein (101aa)
nuoK; NADH-quinone oxidoreductase subunit K (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K {ECO:0000313|EMBL:AFU58099.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58099.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit K Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ4_NITGG
PLM3_30_b1_sep16_scaffold_156_29
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27675..28199)
DNA (525bp) protein (175aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J {ECO:0000313|EMBL:AIC15393.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AIC15393.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
NADH-quinone oxidoreductase subunit J Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
Displaying items 1-30 of 31 in total

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