ggKbase home page

PLM3_30_b1_sep16_scaffold_446_6

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: comp(3453..4493)

Top 3 Functional Annotations

Value Algorithm Source
NHL repeat containing protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKB4_METPE similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 334.0
  • Bit_score: 264
  • Evalue 9.60e-68
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 309.0
  • Bit_score: 271
  • Evalue 2.20e-70
Uncharacterized protein {ECO:0000313|EMBL:AKB43863.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 309.0
  • Bit_score: 271
  • Evalue 1.10e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina vacuolata → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1041
ATGGTTGCTATAATAACTTTGATAATCTTTTTAGTAGTCTTTATTTTAGTAAATGTCTCCATTAAAACAATCTCATTTCAAAACGCTGCCGCAGTCAATGAACAACTCAACTATTCATTTATTGAAAAATGGGGCTCATTCGGTACAGGTCCTGGTCAATTTAATAGACCACATGATGTAGCCTTTGATTCCAGAGGAAACTTGTATGTTAGTGATAGAGATAACAATCGTATCCAGAAATTTACGCAAAATGGAACGTTCGTAAAAACATGGGGTTCAAAAGGATCAGAAAATGGACAGTTTAATATTCCATATAGCATAGCCATAGATAATTTAGATAAAATTTATGTTGCTGATAGAGAGAACTCACGTATCCAGAAGTTTGATACTAACGGTACTTTTCTAGCAAAGTACGGTATCGATGGTAAACTCAATGGACAATTCCATAGACCAGAAGATGTTCGGATTGAGCCACATACTGGAAACATCTATGTCACAGATACATATAACAATCGGATAGAGAGGTTCGATAAGAACTTCACGTTCATTACAAAGTGGGGTTCCAAGGGCACGGCAGATGGGCAGTTCAAGCTTCCCCATGCAATTGGCTTTGACTCAAAGGGTAATGTGTATGTAGATGAGCTAGAAAGACCAGGAGTTCAAATATTTGATGGTGATGGAAAGTTTCTAAGGAAGTGGGGTACTGTTGGAACAGCTGATGGTCAATTTTCTCTTCCTCAGGAACATCTTTGGATAGATTCACATGATCATCTATATCTTGTTGATGGAGCACCCAATCCTCGAATAGAAATATTTGATATAGATGGTCACTTTCTAGGAAAAGTTGGTTCTGCTTGCAAGCTTTCTACTAGTACAGGATGTGTAGATCCCGACGGATTAGGTCCGTTATCTTTGGGCGACGGTCAATTTTCGAAGCCAGAACATGTAGCTATAGATTCTGAAGGTAAAATGTATGTTGTGGACAGGGGTAATCACCGCATTCAAGTTTTTGCTCCTGCGACGAATGAGTTAAGTAAATAG
PROTEIN sequence
Length: 347
MVAIITLIIFLVVFILVNVSIKTISFQNAAAVNEQLNYSFIEKWGSFGTGPGQFNRPHDVAFDSRGNLYVSDRDNNRIQKFTQNGTFVKTWGSKGSENGQFNIPYSIAIDNLDKIYVADRENSRIQKFDTNGTFLAKYGIDGKLNGQFHRPEDVRIEPHTGNIYVTDTYNNRIERFDKNFTFITKWGSKGTADGQFKLPHAIGFDSKGNVYVDELERPGVQIFDGDGKFLRKWGTVGTADGQFSLPQEHLWIDSHDHLYLVDGAPNPRIEIFDIDGHFLGKVGSACKLSTSTGCVDPDGLGPLSLGDGQFSKPEHVAIDSEGKMYVVDRGNHRIQVFAPATNELSK*