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PLM3_30_b1_sep16_scaffold_446

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_446_1
unknown

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3..305
DNA (303bp) protein (101aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_2
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(819..1328)
DNA (510bp) protein (170aa)
Ferritin Dps family protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYI8_9ARCH
Ferritin Dps family protein {ECO:0000313|EMBL:EGP94150.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
ferritin Dps family protein
PLM3_30_b1_sep16_scaffold_446_3
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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1415..1756
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0P4_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI62266.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
PLM3_30_b1_sep16_scaffold_446_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2134..2664
DNA (531bp) protein (177aa)
Heat-shock protein Hsp22 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I879_NITGG
hsp20; heat-shock protein Hsp22
Heat-shock protein Hsp22 {ECO:0000313|EMBL:AFU57476.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_446_5
unknown

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2722..3045
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_6
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3453..4493)
DNA (1041bp) protein (347aa)
NHL repeat containing protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKB4_METPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB43863.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
PLM3_30_b1_sep16_scaffold_446_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5026..6348)
DNA (1323bp) protein (441aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILJ9_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU60468.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_446_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6668..7084
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57994.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_446_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7155..8126)
DNA (972bp) protein (324aa)
PKD domain containing protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GF92_METPE
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
PLM3_30_b1_sep16_scaffold_446_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8280..8486)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN05_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14815.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_446_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8848..9753
DNA (906bp) protein (302aa)
Transcription initiation factor IIB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILN8_NITGG
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AIC15462.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_446_12
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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9924..10295
DNA (372bp) protein (124aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00035D4A6E
Tax=CG_Anaero_02
PLM3_30_b1_sep16_scaffold_446_13
unknown

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comp(10417..10665)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_14
unknown

Not on your lists

comp(10726..10854)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10951..11883)
DNA (933bp) protein (311aa)
Pirin domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7F9_NITGG
pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:AFU57171.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3_30_b1_sep16_scaffold_446_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12060..12434
DNA (375bp) protein (125aa)
Putative transcriptional regulator, HxlR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG2_NITGG
transcriptional regulator, HxlR family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AIF85366.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_446_17
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(12611..13003)
DNA (393bp) protein (131aa)
Putative Pyridoxamine 5'-phosphate oxidase Tax=Thaumarchaeota archaeon N4 RepID=V6ATJ3_9ARCH
Putative Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CDI06036.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain-containing protein
PLM3_30_b1_sep16_scaffold_446_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13202..14440)
DNA (1239bp) protein (413aa)
Transporter, major facilitator family protein Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0U0_9ARCH
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AIF84826.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_446_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14609..14890)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIE2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84521.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_446_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15062..16306
DNA (1245bp) protein (415aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83131.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b1_sep16_scaffold_446_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16477..17610
DNA (1134bp) protein (378aa)
ABC uptake transporter, substrate-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGM5_NITGG
ABC uptake transporter, substrate-binding protein
ABC uptake transporter, substrate-binding protein {ECO:0000313|EMBL:AIC16680.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3_30_b1_sep16_scaffold_446_22
unknown

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17633..17785
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_23
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17863..19107)
DNA (1245bp) protein (415aa)
Rhodanese domain-containing protein Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKD2_9ARCH
Rhodanese domain-containing protein
Rhodanese domain-containing protein {ECO:0000313|EMBL:AJM92005.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM3_30_b1_sep16_scaffold_446_24
unknown

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comp(19933..20136)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_25
unknown

Not on your lists

20270..20788
DNA (519bp) protein (173aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_26
unknown

Not on your lists

20956..21180
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_446_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22531..22827
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ98_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60090.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 27 items

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