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PLM3_30_b1_sep16_scaffold_10_26

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: comp(19510..20298)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL40_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 346
  • Evalue 1.40e-92
ecr; exosome complex RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 346
  • Evalue 4.10e-93
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 223.0
  • Bit_score: 346
  • Evalue 2.00e-92

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 789
ATGCAGGAAGTTAAAAGAAAATACGTTATTCCTGGTGATATTGTAGCTGAAGGTAATTTCAAACCTTTGGGTAATGTGTTTAGGAATGGAAATTCAATTGTAGCAACTCGAATTGGAATTACAGAGTCAAATAAGGATGGTACCAAAGTAATTCCGTTATCAGGAATTTATTTTCCTCGAGTAAATGATATTGTAATAGGTAAAATACTAGACCATTCATCACTTTCCTGGTCTGTCGACATAAATTCATGTTTTTCTGCACATTTGCCAGCACAAGACATATTTGGAAGAGATTTTTCCCCGGCGCATGATGATATGGGACGTCAATTATCAACCGGTGATGTTATTGCTGCTAGAATTGCAATTTTTGATAGGACTAGAGATCCAATTCTAACAATTCAAGATAAGGATTTGGGAAAGATCCCGACAGGTGAATTATTAAAAATATCTGCGACTAGAGTTCCAAGACTTATAGGAAAAAGAGGGTCGATGATCCAAACTATTGAGCAGGCGAGTTCCACAAGGGTAACAATAGGTCAAAATGGAATAATAGTAGTATCAGGAAAAGACAAGGAAGGAATCAATCTTGCAATAAACGCAATTCATATAGTAGAAGTAGAAGCACATACTTCAAACCTTACGCAAAGAATTAAACAACTCTTGAATGTACCAGAATCTAACATTGAAAATGATGACACTCAAAACAATCATGAGATGAATGATGATAAAGTTATTTCGAACGATAATGGTAAAGAAATCGGAATGGTGAATTCAGATGGTACAAAATAG
PROTEIN sequence
Length: 263
MQEVKRKYVIPGDIVAEGNFKPLGNVFRNGNSIVATRIGITESNKDGTKVIPLSGIYFPRVNDIVIGKILDHSSLSWSVDINSCFSAHLPAQDIFGRDFSPAHDDMGRQLSTGDVIAARIAIFDRTRDPILTIQDKDLGKIPTGELLKISATRVPRLIGKRGSMIQTIEQASSTRVTIGQNGIIVVSGKDKEGINLAINAIHIVEVEAHTSNLTQRIKQLLNVPESNIENDDTQNNHEMNDDKVISNDNGKEIGMVNSDGTK*