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PLM3_30_b1_sep16_scaffold_143_22

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: comp(20982..21983)

Top 3 Functional Annotations

Value Algorithm Source
gds; geranylgeranyl pyrophosphate synthase (EC:2.5.1.1 2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 332.0
  • Bit_score: 377
  • Evalue 2.80e-102
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:AIC15022.1}; EC=2.5.1.1 {ECO:0000313|EMBL:AIC15022.1};; EC=2.5.1.10 {ECO:0000313|EMBL:AIC15022.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 332.0
  • Bit_score: 377
  • Evalue 1.40e-101
Geranylgeranyl pyrophosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INB6_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 333.0
  • Bit_score: 371
  • Evalue 7.00e-100

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Taxonomy

Nitrososphaera viennensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1002
ATGGATAATCTGAAAAACGACCTCAATGATGTGGTATCACGAGTAAGAAAGTTTACTTCATCTGTTCTTGAGGGTCAACCAATCAGGTTGTATGATGCAGCTAGTACATATCTCACCAGTGGAGGAAAGAAGCTGAGACCATTCATGGTAATAAAGAGTTGTGAAATGTTTGCTGGGAAGGAAGAAAAAGCGTTACCAGCAGCAGCGGCAGTTGAACTAATTCATAATTTTTCCTTGATTCATGATGACATTATGGATAATGATGATATGCGTCACGGCGTCTCTACGGTCCACAAAAAATATGGGTTACCAATTGCTCTCATAGCTGGAGATATTTTATTTTCTAAGGCATTTCAAGTACTCTCCTTACATAGTAAAAAGATAGGGCATGATGATACTATAATAGCAGAAATGAATAGGATTCTCTCTACCGCATGCGTACATGTCTGCGAAGGTCAAGGTCTCGACATACAGATGGCATCTAGCAATAAGATTCCGACTGTAGATGAATACCTAAACATGATACGAAAAAAAACTGCCTCTCTCTTTGAAGTATCTTGTGCATTAGGGGTTTTGTCTTCTGCAAAGCCACTTGTTGATAACGTGAATAACCTTTCTAAATTTGGACGATTTACTGGAATTGCATTTCAACTAATAGATGATTTAATAGGAGTAACAGGCAACCCCAAACTCACAGGAAAAGCAGTTGGAAATGATATAAGAGAAGGTAAAAAAACTTACCCAATATTATTAGCATTAGAAAATGCAGATACGAATAAGAGAGAAAAAATTATGAAGGTTTTTGGATTCAAGGGAGCAAATCGCGATTATGTTGAAGATGCGGTTTATGCAATATCTTCGCTGAATATAGAAGAAGAAGTAAGAAGAACAGCTCATGATAATATGATTAAAGCTTTTGAATCCATAAAGACTTATGATGAAACAAGTGCAAAGAATGCTCTTGTATCTTCTGCAAAGTTTATAGTCCAAAGGAGTCTGTAG
PROTEIN sequence
Length: 334
MDNLKNDLNDVVSRVRKFTSSVLEGQPIRLYDAASTYLTSGGKKLRPFMVIKSCEMFAGKEEKALPAAAAVELIHNFSLIHDDIMDNDDMRHGVSTVHKKYGLPIALIAGDILFSKAFQVLSLHSKKIGHDDTIIAEMNRILSTACVHVCEGQGLDIQMASSNKIPTVDEYLNMIRKKTASLFEVSCALGVLSSAKPLVDNVNNLSKFGRFTGIAFQLIDDLIGVTGNPKLTGKAVGNDIREGKKTYPILLALENADTNKREKIMKVFGFKGANRDYVEDAVYAISSLNIEEEVRRTAHDNMIKAFESIKTYDETSAKNALVSSAKFIVQRSL*