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PLM3-1_50_b1_sep16_scaffold_2043

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2043_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..169
DNA (168bp) protein (56aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60367.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2043_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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251..820
DNA (570bp) protein (190aa)
Putative RNA-binding protein containing KH domain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJU2_NITGG
RNA-binding protein containing KH domain
Putative RNA-binding protein containing KH domain {ECO:0000313|EMBL:AFU60365.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2043_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(882..1463)
DNA (582bp) protein (194aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase, phenylacrylic acid decarboxylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILE7_NITGG
3-octaprenyl-4-hydroxybenzoate carboxy-lyase, phenylacrylic acid decarboxylase
PLM3-1_50_b1_sep16_scaffold_2043_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1512..2408
DNA (897bp) protein (299aa)
PfkB domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK2_NITGG
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:AFU60362.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2043_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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2527..2871
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AU39_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06104.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_2043_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2896..3309
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP20_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60359.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2043_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3306..3611
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILE4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60358.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2043_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3601..4431)
DNA (831bp) protein (277aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Purine nucleoside phosphorylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK0_NITGG
PLM3-1_50_b1_sep16_scaffold_2043_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4403..4933)
DNA (531bp) protein (177aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Adenine phosphoribosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG22_NITGG
PLM3-1_50_b1_sep16_scaffold_2043_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5056..6567)
DNA (1512bp) protein (504aa)
4-hydroxybutyryl-CoA dehydratase (EC:4.2.1.120)
4-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:AFU60354.1}; EC=4.2.1.120 {ECO:0000313|EMBL:AFU60354.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
4-hydroxybutyryl-CoA dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP19_NITGG
PLM3-1_50_b1_sep16_scaffold_2043_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7649..8257
DNA (609bp) protein (203aa)
rlmE; ribosomal RNA large subunit, methyltransferase E (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Ribosomal RNA large subunit methyltransferase E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMJ8_NITGG
PLM3-1_50_b1_sep16_scaffold_2043_12
unknown

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8638..8796
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2043_trna_1
unknown

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8893..8992
DNA (100bp)
transferRNA Ser
Displaying 13 items

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