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PLM3-1_50_b1_sep16_scaffold_2054

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2054_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..711)
DNA (711bp) protein (237aa)
prephenate dehydrogenase (EC:1.3.1.12)
Putative prephenate dehydrogenase {ECO:0000313|EMBL:AFU58567.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AFU58567.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative prephenate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJX0_NITGG
PLM3-1_50_b1_sep16_scaffold_2054_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(713..1417)
DNA (705bp) protein (235aa)
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:AFU58566.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AFU58566.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Aspartate aminotransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB67_NITGG
PLM3-1_50_b1_sep16_scaffold_2054_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1467..1997)
DNA (531bp) protein (177aa)
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:AFU58566.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AFU58566.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Aspartate aminotransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB67_NITGG
PLM3-1_50_b1_sep16_scaffold_2054_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1997..3106)
DNA (1110bp) protein (370aa)
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Chorismate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFH5_NITGG
PLM3-1_50_b1_sep16_scaffold_2054_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3208..4410)
DNA (1203bp) protein (401aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable 3-phosphoshikimate 1-carboxyvinyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN11_NITGG
PLM3-1_50_b1_sep16_scaffold_2054_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4484..5338)
DNA (855bp) protein (285aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00370}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00370};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00370};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Shikimate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHZ8_NITGG
PLM3-1_50_b1_sep16_scaffold_2054_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5335..6180)
DNA (846bp) protein (282aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJW7_NITGG
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3-1_50_b1_sep16_scaffold_2054_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6177..6887)
DNA (711bp) protein (237aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase bin=bin2_Thaum tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_50_b1_sep16_scaffold_2054_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6901..7632)
DNA (732bp) protein (244aa)
membrane protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037484CA
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIF83490.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_2054_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8072..8374
DNA (303bp) protein (101aa)
Signal recognition particle 19 kDa protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAV3_NITGG
srp19; signal recognition particle 19 kDa protein
Signal recognition particle 19 kDa protein {ECO:0000313|EMBL:AFU58461.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2054_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8546..8812
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJK7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58462.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2054_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8809..9879
DNA (1071bp) protein (357aa)
Transcription initiation factor IIB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHP6_NITGG
tfb2; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AIC14903.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_2054_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9905..10672)
DNA (768bp) protein (256aa)
lig; DNA ligase (EC:6.5.1.1)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICR2_NITGG
Displaying 13 items

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