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PLM3-1_50_b1_sep16_scaffold_2854

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2854_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..650)
DNA (648bp) protein (216aa)
Putative radical SAM domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKN7_NITGG
putative radical SAM domain protein
Fe-S oxidoreductase {ECO:0000313|EMBL:AIF84330.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_2854_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(724..1068)
DNA (345bp) protein (115aa)
Putative NUDIX hydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGU3_NITGG
NUDIX hydrolase
Putative NUDIX hydrolase {ECO:0000313|EMBL:AFU59065.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2854_3
unknown

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comp(1225..1665)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2854_trna_1
unknown

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1314..1387
DNA (74bp)
transferRNA Ala
PLM3-1_50_b1_sep16_scaffold_2854_4
unknown

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comp(2269..2439)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2854_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2621..3364
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGU0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59060.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2854_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3323..3709)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INB0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59059.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2854_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3822..4829
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIY6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59058.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2854_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4870..5493
DNA (624bp) protein (208aa)
Protein Ngar_c17860 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN42_NITGG
AMMECR1 domain-containing protein
Protein Ngar_c17860 {ECO:0000256|HAMAP-Rule:MF_00645}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2854_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5622..6791
DNA (1170bp) protein (390aa)
Putative glycosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIC3_NITGG
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AIC14646.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_2854_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6898..7650)
DNA (753bp) protein (251aa)
TPR repeat protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFF6_NITGG
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:AFU58545.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2854_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7796..8338)
DNA (543bp) protein (181aa)
GMP synthase family protein (EC:6.3.5.2)
GMP synthase family protein {ECO:0000313|EMBL:AIF84025.1}; EC=6.3.5.2 {ECO:0000313|EMBL:AIF84025.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative GMP synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB33_NITGG
PLM3-1_50_b1_sep16_scaffold_2854_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8453..9601)
DNA (1149bp) protein (383aa)
priA; DNA primase, small subunit (EC:2.7.7.-)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA primase small subunit PriS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN08_NITGG
PLM3-1_50_b1_sep16_scaffold_2854_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9602..10606)
DNA (1005bp) protein (335aa)
priB; DNA primase, large subunit (EC:2.7.7.-)
DNA primase large subunit PriL Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG0_NITGG
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2854_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10823..11575
DNA (753bp) protein (251aa)
nfo; endonuclease 4 (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable endonuclease 4 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB43_NITGG
PLM3-1_50_b1_sep16_scaffold_2854_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11657..13114
DNA (1458bp) protein (486aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000313|EMBL:AFU59469.1}; EC=6.1.1.14 {ECO:0000313|EMBL:AFU59469.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glycine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ2_NITGG
PLM3-1_50_b1_sep16_scaffold_2854_16
uncultured crenarchaeote 57a5, Crenarchaeota, Archaea

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13232..13735
DNA (504bp) protein (168aa)
CHRD domain containing protein Tax=uncultured crenarchaeote 57a5 RepID=D4N719_9CREN
CHRD domain containing protein {ECO:0000313|EMBL:ACY24505.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 57a5.;"
CHRD domain protein
PLM3-1_50_b1_sep16_scaffold_2854_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13811..14257
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG10L15 RepID=B3TCJ2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83907.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_2854_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14401..15474
DNA (1074bp) protein (358aa)
UDP-glucose/GDP-mannose family dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose family dehydrogenase {ECO:0000313|EMBL:AIC17010.1}; EC=1.1.1.22 {ECO:0000313|EMBL:AIC17010.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
UDP-glucose/GDP-mannose family dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ1_NITGG
PLM3-1_50_b1_sep16_scaffold_2854_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15455..15739
DNA (285bp) protein (95aa)
UDP-glucose/GDP-mannose family dehydrogenase (EC:1.1.1.-)
UDP-glucose/GDP-mannose family dehydrogenase {ECO:0000313|EMBL:AFU59464.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFU59464.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
UDP-glucose/GDP-mannose family dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ1_NITGG
PLM3-1_50_b1_sep16_scaffold_2854_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15750..17138)
DNA (1389bp) protein (463aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Probable cobyrinic acid A,C-diamide synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBT4_NITGG
cobB; cobyrinic acid A,C-diamide synthase
PLM3-1_50_b1_sep16_scaffold_2854_21
unknown

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comp(17290..17427)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 22 items

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