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PLM3-1_50_b1_sep16_scaffold_896

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_896_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..674)
DNA (672bp) protein (224aa)
Putative GHMP kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS5_NITGG
GHMP kinase
Putative GHMP kinase {ECO:0000313|EMBL:AFU58048.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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747..1742
DNA (996bp) protein (332aa)
Putative PhoU family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN4_NITGG
PhoU family protein
Putative PhoU family protein {ECO:0000313|EMBL:AFU58049.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_3
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1778..2098)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4X2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80484.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3-1_50_b1_sep16_scaffold_896_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2192..2839)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8K1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57611.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2953..3168
DNA (216bp) protein (72aa)
Putative cobalt transporter family protein, subunit CbtB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM84_NITGG
cbtB1; cobalt transporter family protein, subunit CbtB
Putative cobalt transporter family protein, subunit CbtB {ECO:0000313|EMBL:AFU57644.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3194..3922
DNA (729bp) protein (243aa)
Putative cobalt transporter family protein, subunit CbtA Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ41_NITGG
cbtA; cobalt transporter family protein, subunit CbtA
Putative cobalt transporter family protein, subunit CbtA {ECO:0000313|EMBL:AFU58167.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4455..4751
DNA (297bp) protein (99aa)
Putative deoxyribonuclease/rho motif-related TRAM Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF3_NITGG
deoxyribonuclease/rho motif-related TRAM
Putative deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:AFU59274.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_8
unknown

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4886..5284
DNA (399bp) protein (133aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_896_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5569..6051
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKW6_NITGG
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC16869.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_896_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6097..7290)
DNA (1194bp) protein (398aa)
BNR/Asp-box repeats-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIX2_NITGG
BNR/Asp-box repeats-containing protein
BNR/Asp-box repeats-containing protein {ECO:0000313|EMBL:AFU58077.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7561..8349
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIG8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59700.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_12
RBG_16_Archaea_50_20_curated, Archaea

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8358..8621
DNA (264bp) protein (88aa)
hypothetical protein
hypothetical protein bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_16_Archaea_50_20_curated
PLM3-1_50_b1_sep16_scaffold_896_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8630..8878
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILV4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82090.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_896_14
unknown

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9527..9967
DNA (441bp) protein (147aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_896_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10090..10974)
DNA (885bp) protein (295aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Protease HtpX homolog Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDJ8_NITGG
protease htpX
PLM3-1_50_b1_sep16_scaffold_896_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11117..11629
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJT8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60355.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_17
unknown

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comp(11736..11849)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_896_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12031..13005
DNA (975bp) protein (325aa)
Putative histone deacetylase superfamily Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY5_NITGG
histone deacetylase superfamily
Putative histone deacetylase superfamily {ECO:0000313|EMBL:AFU60184.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_896_19
unknown

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13085..13585
DNA (501bp) protein (167aa)

This feature has no annotations

Displaying 19 items

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