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PLM3-1_50_b1_sep16_scaffold_898

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_898_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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270..1049
DNA (780bp) protein (260aa)
Putative TatD-like deoxyribonuclease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFP3_NITGG
TatD-like deoxyribonuclease
Putative TatD-like deoxyribonuclease {ECO:0000313|EMBL:AFU57653.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_898_2
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1059..1892
DNA (834bp) protein (278aa)
Xylose isomerase domain protein TIM barrel Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYB6_9ARCH
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EGP92894.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
AP endonuclease, family 2
PLM3-1_50_b1_sep16_scaffold_898_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1966..2877
DNA (912bp) protein (304aa)
Putative UbiA prenyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8P7_NITGG
UbiA prenyltransferase
Putative UbiA prenyltransferase {ECO:0000313|EMBL:AFU57651.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_898_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2923..4245
DNA (1323bp) protein (441aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDA9_NITGG
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AFU57650.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_898_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4263..5099
DNA (837bp) protein (279aa)
Putative xylose isomerase domain protein TIM barrel Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM86_NITGG
xylose isomerase domain-containing protein TIM barrel
Putative xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:AFU57649.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_898_6
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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5161..6168
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3C0_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX12549.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM3-1_50_b1_sep16_scaffold_898_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(6136..7479)
DNA (1344bp) protein (448aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATQ2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06022.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_898_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8179..9159)
DNA (981bp) protein (327aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:AFU58628.1}; EC=1.1.1.3 {ECO:0000313|EMBL:AFU58628.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Homoserine dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II55_NITGG
PLM3-1_50_b1_sep16_scaffold_898_9
unknown

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9382..9615
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_898_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9743..10396
DNA (654bp) protein (218aa)
Putative phosphate transport regulator Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN39_NITGG
phosphate transport regulator
Putative phosphate transport regulator {ECO:0000313|EMBL:AFU58704.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_898_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10396..10947
DNA (552bp) protein (184aa)
endA1; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000313|EMBL:AFU58703.1}; EC=3.1.27.9 {ECO:0000313|EMBL:AFU58703.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
tRNA-splicing endonuclease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIB9_NITGG
PLM3-1_50_b1_sep16_scaffold_898_12
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11064..11345)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BD80_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83027.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM3-1_50_b1_sep16_scaffold_898_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11498..13291
DNA (1794bp) protein (598aa)
sdr3; glucose/ribitol dehydrogenase family protein (EC:1.1.1.-)
Glucose/ribitol dehydrogenase family protein {ECO:0000313|EMBL:AFU58651.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFU58651.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glucose/ribitol dehydrogenase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBJ6_NITGG
PLM3-1_50_b1_sep16_scaffold_898_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13386..15203
DNA (1818bp) protein (606aa)
Putative PilT protein domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGT4_NITGG
ATPase, PilT family
ATPase, PilT family {ECO:0000313|EMBL:AIF84346.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_898_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15275..16456)
DNA (1182bp) protein (394aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
putative quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AIC14760.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_898_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16523..16912)
DNA (390bp) protein (130aa)
Putative signal transduction protein with CBS domains Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFD1_NITGG
putative signal-transduction protein containing cAMP-binding and CBS domains
Putative signal-transduction protein containing cAMP-binding and CBS domains {ECO:0000313|EMBL:AIF84054.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_898_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17082..17774
DNA (693bp) protein (231aa)
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Phosphoribosylformylglycinamidine synthase 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB05_NITGG
PLM3-1_50_b1_sep16_scaffold_898_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17790..19961
DNA (2172bp) protein (724aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Phosphoribosylformylglycinamidine synthase 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
PLM3-1_50_b1_sep16_scaffold_898_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20019..21449
DNA (1431bp) protein (477aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Amidophosphoribosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
PLM3-1_50_b1_sep16_scaffold_898_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21677..21934
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFD6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84050.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_898_21

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22022..22465
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKL6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24876.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_898_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(22503..23258)
DNA (756bp) protein (252aa)
fabG1; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFU57346.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AFU57346.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7V2_NITGG
PLM3-1_50_b1_sep16_scaffold_898_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23327..24526
DNA (1200bp) protein (400aa)
5-(carboxyamino)imidazole ribonucleotide synthase (EC:6.3.4.18)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Phosphoribosylaminoimidazole carboxylase ATPase subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFR4_NITGG
PLM3-1_50_b1_sep16_scaffold_898_24
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24546..25010
DNA (465bp) protein (155aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKC0_IGNAJ
purE; 5-(carboxyamino)imidazole ribonucleotide mutase
PLM3-1_50_b1_sep16_scaffold_898_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25032..26780)
DNA (1749bp) protein (583aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58320.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_898_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(26800..27006)
DNA (207bp) protein (69aa)
Preprotein translocase subunit SecG Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW2_NITGG
secB; protein translocase subunit SecB
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_898_27
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(27013..27420)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVS6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP93378.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_898_28
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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27602..27910
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ96_NITGG
protein translation factor SUI1
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_898_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(28027..28305)
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBS5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83812.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_898_30
unknown

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comp(28543..28863)
DNA (321bp) protein (107aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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