ggKbase home page

PLM3-1_50_b1_sep16_scaffold_218_11

Organism: PLM6_50_b1_sep16_Thaumarchaeota_Marine_Group_I_36_8

near complete RP 33 / 55 MC: 3 BSCG 19 / 51 MC: 2 ASCG 37 / 38 MC: 1
Location: comp(8057..8686)

Top 3 Functional Annotations

Value Algorithm Source
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9) similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 200.0
  • Bit_score: 232
  • Evalue 9.00e-59
Riboflavin synthase alpha chain {ECO:0000313|EMBL:AFU60183.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AFU60183.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 200.0
  • Bit_score: 232
  • Evalue 4.50e-58
Riboflavin synthase alpha chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL68_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 200.0
  • Bit_score: 232
  • Evalue 3.20e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 630
ATGATAGCAATTGTTTATCAATACTTTATGTTCACTGGTATCGTAGAAGGTACTGGAATTATCAAATCAATGGTCAAAATAAATGACAATGATAAAGCCGCCGACAATAGGATTGAAATAGATCTGGGAAAATTGAGCAAGGGTCTAGAAGTAGGTGATAGTGTAAATGTTAATGGAACATGCCTCACGGCAACACGGATTTTGAAAAGCGTAGCATATTTTGAAGTCGTAAAAGAAACCATGAAACGGACCGCTTTAGGAAACTTGAAAGTTGGAGATCAAGTAAATCTAGAAAGGAGTTTGAGGATAAACGATAGACTTGAAGGGCATATTGTCTTGGGTCATGTAGATGGCGTTGGAAAAATAGAGGATATCAAGAAGATTCCCTCTGAGACCAAAATGTGGATAAATGTGAGCAAGGAGATTTCAAAGTATTTGGTACCAAAAGGGTCTGTTGCCCTAGATGGTATAAGCTTTACCATTGTTGATGTCTCAGATACAAGATTTTCAGTTGCCTTAGTTCCTCATACACTGGCCGTTACCACGTTTAAAAATAAACGAAAAGGAGATAAAGTTAATATTGAGGCAGATATTTTAAGCAAGTATGTCACAAAATTATTACCACGTTAG
PROTEIN sequence
Length: 210
MIAIVYQYFMFTGIVEGTGIIKSMVKINDNDKAADNRIEIDLGKLSKGLEVGDSVNVNGTCLTATRILKSVAYFEVVKETMKRTALGNLKVGDQVNLERSLRINDRLEGHIVLGHVDGVGKIEDIKKIPSETKMWINVSKEISKYLVPKGSVALDGISFTIVDVSDTRFSVALVPHTLAVTTFKNKRKGDKVNIEADILSKYVTKLLPR*