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S_p1_S3_coassembly_k141_1954181

Search features with annotation key words

Displaying items 1-30 of 700 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1954181_1

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3..1190
DNA (1188bp) protein (396aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK99224.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transposase, IS4 family protein/SWIM domain fusion bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S_p1_S3_coassembly_k141_1954181_2
AR13, Pacearchaeaota, DPANN, Archaea

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comp(1275..1841)
DNA (567bp) protein (189aa)
Tax=AR13
S_p1_S3_coassembly_k141_1954181_3

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1900..2841
DNA (942bp) protein (314aa)
protoheme IX farnesyltransferase (EC:2.5.1.-)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Protoheme IX farnesyltransferase {ECO:0000313|EMBL:AJF59707.1}; EC=2.5.1.- {ECO:0000313|EMBL:AJF59707.1};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1954181_4

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2854..3606
DNA (753bp) protein (251aa)
Putative glycosyltransferase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YV10_METPS
Marine sediment metagenome DNA, contig: S01H1_S38934 {ECO:0000313|EMBL:GAG53097.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative glycosyltransferase
S_p1_S3_coassembly_k141_1954181_5
Pseudothermotoga lettingae, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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3603..4598
DNA (996bp) protein (332aa)
glycosyl transferase, group 1 family protein (EC:2.4.1.-)
Glycosyl transferase group 1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F8Y3_THELT
Glycosyl transferase group 1 {ECO:0000313|EMBL:ABV32583.1}; Flags: Precursor;; species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC; 107922 / TMO) (Thermotoga lettingae).;"
S_p1_S3_coassembly_k141_1954181_6
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

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5130..5933
DNA (804bp) protein (268aa)
Hydroxyethylthiazole kinase (EC:2.7.1.50)
UPI0003D1B409 related cluster Tax=unknown RepID=UPI0003D1B409
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
S_p1_S3_coassembly_k141_1954181_7
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5914..6579
DNA (666bp) protein (222aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
Thiamine-phosphate synthase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWI0_METHD
thiamine-phosphate pyrophosphorylase
S_p1_S3_coassembly_k141_1954181_8
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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6607..7572
DNA (966bp) protein (322aa)
Thiamine-monophosphate kinase Tax=uncultured organism RepID=M1PWT1_9ZZZZ
thiamine-monophosphate kinase
Tax=RBG_13_Euryarchaeota_31_8_curated
S_p1_S3_coassembly_k141_1954181_9

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7834..10509
DNA (2676bp) protein (892aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Ribonucleoside-diphosphate reductase alpha chain {ECO:0000313|EMBL:KHO47811.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KHO47811.1};; species="Archaea.;" source="archaeon GW2011_AR5.;"
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
S_p1_S3_coassembly_k141_1954181_10
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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10581..11156
DNA (576bp) protein (192aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase Tax=uncultured candidate division OP1 bacterium RepID=H5SQQ5_9BACT
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:BAL55871.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
S_p1_S3_coassembly_k141_1954181_11
Capnocytophaga sp. CM59, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11173..11574)
DNA (402bp) protein (134aa)
Putative lipoprotein Tax=Capnocytophaga sp. CM59 RepID=J5XTP7_9FLAO
Putative lipoprotein {ECO:0000313|EMBL:EJU31682.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. CM59.;"
S_p1_S3_coassembly_k141_1954181_12
GWF2_CPR3_35_18, CPR3, Bacteria

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comp(11745..13133)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein bin=GWF2_CPR3_35_18 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWF2_CPR3_35_18 organism_group=CPR3
Uncharacterized protein {ECO:0000313|EMBL:KKP69075.1}; species="Bacteria; candidate division CPR3.;" source="candidate division CPR3 bacterium GW2011_GWF2_35_18.;"
S_p1_S3_coassembly_k141_1954181_13
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(13178..18058)
DNA (4881bp) protein (1627aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Streptomyces RepID=D1WTT1_9ACTO bin=ACD38 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=CG_Pacearch_01
S_p1_S3_coassembly_k141_1954181_14

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comp(18150..19454)
DNA (1305bp) protein (435aa)
L-threonine synthase (EC:4.2.3.1)
Uncharacterized protein {ECO:0000313|EMBL:KKM21165.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
L-threonine synthase bin=GWF2_Lentisphaerae_49_21 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
S_p1_S3_coassembly_k141_1954181_15
unknown

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comp(19505..20179)
DNA (675bp) protein (225aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1954181_16
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(20176..21102)
DNA (927bp) protein (309aa)
thrB; homoserine kinase (EC:2.7.1.39)
homoserine kinase Tax=Cytophaga aurantiaca RepID=UPI0003815C54
Tax=RBG_16_Nitrospirae_64_22_curated
S_p1_S3_coassembly_k141_1954181_17
AR11, Woesearchaeaota, DPANN, Archaea

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21246..22145
DNA (900bp) protein (300aa)
Pyridoxal biosynthesis lyase PdxS Tax=Methanobrevibacter RepID=B9ADK8_METSM
pyridoxal biosynthesis lyase PdxS
Tax=AR11
S_p1_S3_coassembly_k141_1954181_18
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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22212..22844
DNA (633bp) protein (211aa)
Glutamine amidotransferase subunit PdxT Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9E4K5_9BACL
glutamine amidotransferase subunit PdxT
Tax=S_Thermoanaerobacterales_50_218
S_p1_S3_coassembly_k141_1954181_19
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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22875..24137
DNA (1263bp) protein (421aa)
Mg/Co/Ni transporter MgtE domain protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C0E5_METCG
Mg/Co/Ni transporter MgtE domain-containing protein
Mg/Co/Ni transporter MgtE domain protein {ECO:0000313|EMBL:AEB69210.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
S_p1_S3_coassembly_k141_1954181_20
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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24175..25407
DNA (1233bp) protein (411aa)
Putative transporter (NRAMP family) Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8Z5_UNCMA
transport protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
S_p1_S3_coassembly_k141_1954181_21
AR4, Woesearchaeaota, DPANN, Archaea

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comp(25596..26483)
DNA (888bp) protein (296aa)
coiled-coil bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S_p1_S3_coassembly_k141_1954181_22
CG_Micra_02, Micraarchaeota, Archaea

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comp(26523..27845)
DNA (1323bp) protein (441aa)
sodium/hydrogen exchanger bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative Na(+)/H(+) antiporter
Tax=CG_Micra_02
S_p1_S3_coassembly_k141_1954181_23
CG_Micra_02, Micraarchaeota, Archaea

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comp(27899..29209)
DNA (1311bp) protein (437aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037249A6
Sodium/hydrogen exchanger
Tax=CG_Micra_02
S_p1_S3_coassembly_k141_1954181_24
CG_Micra_03, Micraarchaeota, Archaea

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comp(29222..30187)
DNA (966bp) protein (322aa)
Na+/Ca+ antiporter, CaCA family Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIA2_KOSOT
Na+/Ca+ antiporter, CaCA family
Tax=CG_Micra_03
S_p1_S3_coassembly_k141_1954181_25
RBG_13_OP11_Gottesmanbacteria_45_10_curated, Gottesmanbacteria, Microgenomates, Bacteria

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30227..31585
DNA (1359bp) protein (453aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZT1_HERA2
hypothetical protein
Tax=RBG_13_OP11_Gottesmanbacteria_45_10_curated
S_p1_S3_coassembly_k141_1954181_26
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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comp(31601..32668)
DNA (1068bp) protein (356aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase Tax=Nitrospina gracilis 3/211 RepID=M1YWG9_9BACT
S_p1_S3_coassembly_k141_1954181_27
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(32682..33584)
DNA (903bp) protein (301aa)
shikimate dehydrogenase (EC:1.1.1.25)
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Chloroflexi_51_9_curated
S_p1_S3_coassembly_k141_1954181_28

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comp(33529..34677)
DNA (1149bp) protein (383aa)
Iron-containing alcohol dehydrogenase Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DKS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKN05211.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alcohol dehydrogenase, class IV
S_p1_S3_coassembly_k141_1954181_29
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(34702..35373)
DNA (672bp) protein (224aa)
3-dehydroquinate dehydratase I (EC:4.2.1.10)
3-dehydroquinate dehydratase, type I (EC:4.2.1.10); K03785 3-dehydroquinate dehydratase I [EC:4.2.1.10] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_Deltaproteobacteria_53_10_curated
S_p1_S3_coassembly_k141_1954181_30

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comp(35375..36472)
DNA (1098bp) protein (366aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110};; species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying items 1-30 of 700 in total

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