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S_p1_S3_coassembly_k141_2206011

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2206011_1
unknown

Not on your lists

539..748
DNA (210bp) protein (70aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2206011_2
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

817..1533
DNA (717bp) protein (239aa)
Tax=CG_Micra_03
S_p1_S3_coassembly_k141_2206011_3
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

1530..2519
DNA (990bp) protein (330aa)
Tax=CG_Micra_03
S_p1_S3_coassembly_k141_2206011_4
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

2516..3745
DNA (1230bp) protein (410aa)
Phosphohydrolase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVG9_9ARCH
Phosphohydrolase {ECO:0000313|EMBL:EGP93271.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
S_p1_S3_coassembly_k141_2206011_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3784..3969
DNA (186bp) protein (62aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
S_p1_S3_coassembly_k141_2206011_6
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4051..5631
DNA (1581bp) protein (527aa)
ABC transporter, ATP-binding protein Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TAD6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGL39092.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str. F0139.;"
thiamine ABC transporter substrate-binding protein
S_p1_S3_coassembly_k141_2206011_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(5713..6237)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIJ1_NITGG
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p1_S3_coassembly_k141_2206011_8
unknown

Not on your lists

comp(6227..7444)
DNA (1218bp) protein (406aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2206011_9
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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comp(7584..8087)
DNA (504bp) protein (168aa)
Putative uncharacterized protein Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVE5_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EFD92783.1}; species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
S_p1_S3_coassembly_k141_2206011_10
unknown

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comp(8092..8376)
DNA (285bp) protein (95aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2206011_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8585..9019)
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71390.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein bin=GWF1_Spirochaetes_51_8 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
glyoxalase/bleomycin resistance protein/dioxygenase
S_p1_S3_coassembly_k141_2206011_12
RHI_OP11_Gottemanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(9056..9976)
DNA (921bp) protein (307aa)
3-demethylubiquinone-9 3-methyltransferase bin=GWE2_RBX1_39_32 species=Methanosalsum zhilinae genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-demethylubiquinone-9 3-methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_OP11_Gottemanbacteria_40_13_curated
S_p1_S3_coassembly_k141_2206011_13
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9991..10329)
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QNV7_ARTGO
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
S_p1_S3_coassembly_k141_2206011_14
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10385..10693)
DNA (309bp) protein (103aa)
hypothetical protein Tax=Woodsholea maritima RepID=UPI00036BBEC2
Uncharacterized protein {ECO:0000313|EMBL:GAF53184.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. JCM 18900.;"
hypothetical protein
S_p1_S3_coassembly_k141_2206011_15
RBG_16_OP11_44_10_curated, Microgenomates, Bacteria

Not on your lists

comp(10690..11124)
DNA (435bp) protein (145aa)
Glyoxalase/bleomycin resistance protein/dioxygenase bin=GWD2_RBX1-related_39_127 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_16_OP11_44_10_curated
S_p1_S3_coassembly_k141_2206011_16
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

Not on your lists

comp(11208..12602)
DNA (1395bp) protein (465aa)
MATE efflux family protein bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
MATE efflux family protein {ECO:0000313|EMBL:KKP41082.1}; species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
MATE efflux family protein
S_p1_S3_coassembly_k141_2206011_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(12610..12996)
DNA (387bp) protein (129aa)
hypothetical protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=AR5
S_p1_S3_coassembly_k141_2206011_18
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(13193..14164)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002DEF9DD
Activator of Hsp90 ATPase 1 family protein
Tax=RBG_13_Chloroflexi_50_21_curated
S_p1_S3_coassembly_k141_2206011_19
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14142..14483)
DNA (342bp) protein (114aa)
Transcriptional regulator, ArsR family Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I885_9BACL
TrmB family transcriptional regulator {ECO:0000313|EMBL:KEQ27733.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
transcriptional regulator TrmB
S_p1_S3_coassembly_k141_2206011_20
unknown

Not on your lists

comp(14577..14915)
DNA (339bp) protein (113aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2206011_21
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15106..15441
DNA (336bp) protein (112aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_2206011_22

Not on your lists

comp(15443..15580)
DNA (138bp) protein (46aa)
Marine sediment metagenome DNA, contig: S01H1_S03205 {ECO:0000313|EMBL:GAF89404.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_2206011_23
unknown

Not on your lists

15765..16016
DNA (252bp) protein (84aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2206011_24
unknown

Not on your lists

16026..16379
DNA (354bp) protein (118aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2206011_25
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16460..17110)
DNA (651bp) protein (217aa)
Dinucleotide-binding enzyme bin=GWF2_Bacteroidetes_41_31 species=Leptospira kmetyi genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
dinucleotide-binding protein
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
S_p1_S3_coassembly_k141_2206011_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17209..18405)
DNA (1197bp) protein (399aa)
UPI0003D1A132 related cluster Tax=unknown RepID=UPI0003D1A132
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
S_p1_S3_coassembly_k141_2206011_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18442..19920)
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MNB5_9EURY
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_2206011_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(19930..20601)
DNA (672bp) protein (224aa)
ABC transporter Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI00036C1E82
ABC transporter, ATP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
S_p1_S3_coassembly_k141_2206011_29
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

20745..21380
DNA (636bp) protein (212aa)
Transcriptional regulator, MarR family Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QQ09_VULDI
MarR family transcriptional regulator
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_2206011_30
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21434..22531)
DNA (1098bp) protein (366aa)
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AIF82628.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
glucose sorbosone dehydrogenase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Displaying items 1-30 of 54 in total

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