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S_p1_S3_coassembly_k141_1893187

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1893187_1

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32..1060
DNA (1029bp) protein (343aa)
nucleolar protein 56
rRNA biogenesis protein Nop56/Nop58; K14564 nucleolar protein 56 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Nucleolar protein 56 {ECO:0000313|EMBL:AJF59545.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1893187_2
AR10, Diapherotrites, DPANN, Archaea

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1068..1742
DNA (675bp) protein (225aa)
fibrillarin-like protein pre-rRNA processing protein
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1893187_3
AR10, Diapherotrites, DPANN, Archaea

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1739..2587
DNA (849bp) protein (283aa)
pantoate kinase (EC:2.7.1.169)
GHMP kinase; K06982 pantoate kinase [EC:2.7.1.169] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1893187_4

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2584..3318
DNA (735bp) protein (245aa)
4-phosphopantoate--beta-alanine ligase (EC:6.3.2.36)
pantothenate synthetase; K09722 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
4-phosphopantoate--beta-alanine ligase {ECO:0000313|EMBL:AJF59542.1}; EC=6.3.2.36 {ECO:0000313|EMBL:AJF59542.1};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1893187_5
AR10, Diapherotrites, DPANN, Archaea

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3315..3881
DNA (567bp) protein (189aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1893187_trna_1
unknown

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3904..3995
DNA (92bp)
transferRNA Arg
S_p1_S3_coassembly_k141_1893187_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4050..4367)
DNA (318bp) protein (106aa)
MazF family transcriptional regulator Tax=Halorubrum californiensis DSM 19288 RepID=M0EGB0_9EURY
MazF family transcriptional regulator
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ACV48821.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 /; NCIMB 13541) (Haloarcula mukohataei).;"
S_p1_S3_coassembly_k141_1893187_7
unknown

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comp(4384..4650)
DNA (267bp) protein (89aa)
transcriptional regulator, AbrB family
S_p1_S3_coassembly_k141_1893187_8
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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4856..6037
DNA (1182bp) protein (394aa)
pyridoxal phosphate-dependent acyltransferase (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase-like enzyme Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T811_9EURY
Tax=RBG_13_Euryarchaeota_31_8_curated
S_p1_S3_coassembly_k141_1893187_9

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comp(6087..6437)
DNA (351bp) protein (117aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PEX1_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:EFK97907.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_1893187_10
AR10, Diapherotrites, DPANN, Archaea

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6602..7303
DNA (702bp) protein (234aa)
hypothetical protein
hypothetical protein; K07731 putative transcriptional regulator bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1893187_11

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comp(7300..8019)
DNA (720bp) protein (240aa)
hypothetical protein
hypothetical protein; K07562 nonsense-mediated mRNA decay protein 3 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59535.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1893187_12
AR10, Diapherotrites, DPANN, Archaea

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comp(8016..9314)
DNA (1299bp) protein (433aa)
hypothetical protein
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1893187_13

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9375..9998
DNA (624bp) protein (208aa)
acetyl-CoA synthetase I subunit beta
acetyl-CoA synthetase I subunit beta bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Acetyl-CoA synthetase I subunit beta {ECO:0000313|EMBL:AJF59532.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1893187_14
AR10, Diapherotrites, DPANN, Archaea

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comp(10000..10635)
DNA (636bp) protein (212aa)
hypothetical protein
Nucleotide-diphospho-sugar transferases bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1893187_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10826..11434
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHH2_THEBM
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_p1_S3_coassembly_k141_1893187_16
CG_Micra_05, Micraarchaeota, Archaea

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11431..11589
DNA (159bp) protein (53aa)
hypothetical protein
seg bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_05
S_p1_S3_coassembly_k141_1893187_17
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(11632..12489)
DNA (858bp) protein (286aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
Protease HtpX homolog Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LK13_THEBM
peptidase precursor
S_p1_S3_coassembly_k141_1893187_18
unknown

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comp(12499..13008)
DNA (510bp) protein (170aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1893187_19
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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13190..18499
DNA (5310bp) protein (1770aa)
Putative secreted subtilisin-like serine protease Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1W2W3_STRGG
Peptidase {ECO:0000313|EMBL:KIF69158.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
subtilisin-like serine protease
S_p1_S3_coassembly_k141_1893187_20

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18553..22197
DNA (3645bp) protein (1215aa)
Marine sediment metagenome DNA, contig: S01H1_S01696 {ECO:0000313|EMBL:GAF87499.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative lipoprotein bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Displaying 21 items

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