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S_p1_S3_coassembly_k141_2339560

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2339560_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..113
DNA (111bp) protein (37aa)
50S ribosomal protein L6 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9K1_HALJB
rpl6p; 50S ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 /; KCTC 4019 / B3).;"
S_p1_S3_coassembly_k141_2339560_2
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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110..517
DNA (408bp) protein (136aa)
LSU ribosomal protein L32E bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
ribosomal protein L32e Rpl32e
Ribosomal protein L32e Rpl32e {ECO:0000313|EMBL:ADC46720.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
S_p1_S3_coassembly_k141_2339560_3
unknown

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495..677
DNA (183bp) protein (61aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2339560_4

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731..1138
DNA (408bp) protein (136aa)
rpl19e; 50S ribosomal protein L19; K02885 large subunit ribosomal protein L19e bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; species="Archaea.;" source="archaeon GW2011_AR5.;"
rpl19e; 50S ribosomal protein L19e
S_p1_S3_coassembly_k141_2339560_5
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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1119..1676
DNA (558bp) protein (186aa)
50S ribosomal protein L18P Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXW1_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
50S ribosomal protein L18
S_p1_S3_coassembly_k141_2339560_6

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1673..2323
DNA (651bp) protein (217aa)
30S ribosomal protein S5 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Small subunit ribosomal protein S5 {ECO:0000313|EMBL:KHO48319.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
30S ribosomal protein S5
S_p1_S3_coassembly_k141_2339560_7
AR5, Aenigmarchaeota, DPANN, Archaea

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2325..2681
DNA (357bp) protein (119aa)
50S ribosomal protein L30P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rpl30p; 50S ribosomal protein L30
Tax=AR5
S_p1_S3_coassembly_k141_2339560_8

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2811..3218
DNA (408bp) protein (136aa)
rpl15p; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15
S_p1_S3_coassembly_k141_2339560_9
unknown

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3342..3578
DNA (237bp) protein (79aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2339560_10
AR5, Aenigmarchaeota, DPANN, Archaea

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3625..5148
DNA (1524bp) protein (508aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
secY; preprotein translocase subunit SecY
Tax=AR5
Displaying 10 items

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