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S_p1_S3_coassembly_k141_234688

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_234688_1
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(178..1851)
DNA (1674bp) protein (558aa)
ATP-dependent DNA ligase Tax=nanoarchaeote Nst1 RepID=R1FU25_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATP-dependent DNA ligase
Tax=AR20
S_p1_S3_coassembly_k141_234688_2

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1894..2565
DNA (672bp) protein (224aa)
nitroreductase bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Nitroreductase {ECO:0000313|EMBL:KHO53183.1}; species="Archaea.;" source="archaeon GW2011_AR18.;"
Nitroreductase
S_p1_S3_coassembly_k141_234688_3
unknown

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2558..2881
DNA (324bp) protein (108aa)

This feature has no annotations

S_p1_S3_coassembly_k141_234688_4
AR20, Woesearchaeaota, DPANN, Archaea

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comp(3004..4146)
DNA (1143bp) protein (381aa)
Cell division protein FtsZ Tax=Candidatus Parvarchaeum RepID=D6GVI7_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cell division protein FtsZ
Tax=AR20
S_p1_S3_coassembly_k141_234688_5
CG_Woesearch_02, Woesearchaeota, Archaea

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4532..5830
DNA (1299bp) protein (433aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit D
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_234688_6

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comp(5831..6382)
DNA (552bp) protein (184aa)
Marine sediment metagenome DNA, contig: S12H4_L01632 {ECO:0000313|EMBL:GAI74216.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_234688_7
unknown

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6736..7518
DNA (783bp) protein (261aa)

This feature has no annotations

S_p1_S3_coassembly_k141_234688_8
AR20, Woesearchaeaota, DPANN, Archaea

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7515..9296
DNA (1782bp) protein (594aa)
Minimal nucleotidyltransferase fused to HEPN domain Tax=nanoarchaeote Nst1 RepID=R1G367_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Minimal nucleotidyltransferase fused to HEPN protein
Tax=AR20
S_p1_S3_coassembly_k141_234688_trna_1
unknown

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9499..9584
DNA (86bp)
transferRNA Asp
S_p1_S3_coassembly_k141_234688_9
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

9683..9982
DNA (300bp) protein (100aa)
DNA-directed RNA polymerase, subunit H Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase, subunit H
Tax=AR20
S_p1_S3_coassembly_k141_234688_10
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

9984..11474
DNA (1491bp) protein (497aa)
DNA-directed RNA polymerase Tax=Thermococcus RepID=Q5JE32_PYRKO bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Tax=AR20
S_p1_S3_coassembly_k141_234688_11

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11467..13269
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR9_METFV bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
S_p1_S3_coassembly_k141_234688_12
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

13271..15787
DNA (2517bp) protein (839aa)
DNA-directed RNA polymerase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Tax=AR20
S_p1_S3_coassembly_k141_234688_13
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

15780..16928
DNA (1149bp) protein (383aa)
DNA-directed RNA polymerase subunit A'' bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
Tax=AR15
S_p1_S3_coassembly_k141_234688_14

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16925..17173
DNA (249bp) protein (83aa)
50S ribosomal protein L30e Tax=Sulfolobus RepID=RL30E_SULSO bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e
50S ribosomal protein L30e {ECO:0000313|EMBL:AJF63053.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_234688_15

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17175..17576
DNA (402bp) protein (134aa)
Putative KH domain protein Tax=environmental samples RepID=B3T301_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63047.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_234688_16
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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17576..19528
DNA (1953bp) protein (651aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036585B1
30S ribosomal protein S12
Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307; / IC-167).;"
S_p1_S3_coassembly_k141_234688_17
unknown

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19530..19664
DNA (135bp) protein (45aa)

This feature has no annotations

S_p1_S3_coassembly_k141_234688_18

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19661..20254
DNA (594bp) protein (198aa)
30S ribosomal protein S7 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO52604.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
30S ribosomal protein S7
S_p1_S3_coassembly_k141_234688_19
unknown

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20487..20621
DNA (135bp) protein (45aa)

This feature has no annotations

S_p1_S3_coassembly_k141_234688_20
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(20618..20941)
DNA (324bp) protein (108aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_234688_21

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21323..21841
DNA (519bp) protein (173aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D3CD3
Uncharacterized protein {ECO:0000313|EMBL:KKL21741.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PE-PGRS family protein
S_p1_S3_coassembly_k141_234688_22
Penicillium italicum, Penicillium, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

21828..22625
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO75822.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.;" source="Penicillium italicum.;"
Displaying 23 items

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