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S_p2_S4_coassembly_k141_57285

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_57285_1
AR4, Woesearchaeaota, DPANN, Archaea

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77..928
DNA (852bp) protein (284aa)
binding component of abc transporter; K02030 polar amino acid transport system substrate-binding protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
periplasmic component of amino acid ABC-type transporter/signal transduction system
Tax=AR4
S_p2_S4_coassembly_k141_57285_2
AR4, Woesearchaeaota, DPANN, Archaea

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947..1603
DNA (657bp) protein (219aa)
ABC transporter permease; K02029 polar amino acid transport system permease protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
polar amino acid ABC transporter, inner membrane subunit
Tax=AR4
S_p2_S4_coassembly_k141_57285_3
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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1600..2778
DNA (1179bp) protein (393aa)
Glutamine ABC superfamily ATP binding cassette transporter, ABC protein Tax=Bacillus pumilus (strain SAFR-032) RepID=A8FI84_BACP2
glnQ2; glutamine ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EHL15702.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
S_p2_S4_coassembly_k141_57285_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2887..3066)
DNA (180bp) protein (60aa)
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_57285_5
AR11, Woesearchaeaota, DPANN, Archaea

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3288..4274
DNA (987bp) protein (329aa)
Carbohydrate kinase Tax=sediment metagenome RepID=D9PEX2_9ZZZZ
ribokinase family sugar kinase
Tax=AR11
S_p2_S4_coassembly_k141_57285_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4268..4903)
DNA (636bp) protein (212aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_57285_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(4946..5254)
DNA (309bp) protein (103aa)
Putative Rieske-type ferredoxin bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
dioxygenase, ferredoxin subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
S_p2_S4_coassembly_k141_57285_8
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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5376..7796
DNA (2421bp) protein (807aa)
ppsA5; protein PpsA5 (EC:2.7.9.2)
Phosphoenolpyruvate synthase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=GWA2_WOR_2_47_8_curated
S_p2_S4_coassembly_k141_57285_9
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(7799..8920)
DNA (1122bp) protein (374aa)
Putative RNA methylase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase
Tax=GWA2_WOR_2_47_8_curated
S_p2_S4_coassembly_k141_57285_10
Parcubacteria bacterium GW2011_GWE2_37_8, Parcubacteria, Bacteria

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comp(8951..9586)
DNA (636bp) protein (212aa)
id=3506661 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Uncharacterized protein {ECO:0000313|EMBL:KKQ42834.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_37_8.;"
hypothetical protein
S_p2_S4_coassembly_k141_57285_11
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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9689..10009
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12384.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
S_p2_S4_coassembly_k141_57285_12
unknown

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10043..10519
DNA (477bp) protein (159aa)

This feature has no annotations

S_p2_S4_coassembly_k141_57285_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10536..11741)
DNA (1206bp) protein (402aa)
peptidase m50 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptidase M50
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_57285_14

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comp(11758..11919)
DNA (162bp) protein (54aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01599.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5800377 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
S_p2_S4_coassembly_k141_57285_15

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comp(11919..12320)
DNA (402bp) protein (134aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Translation initiation factor 5A bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
S_p2_S4_coassembly_k141_57285_16

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comp(12399..12539)
DNA (141bp) protein (47aa)
transcription factor CBF/NF-Y/histone domain-containing protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor CBF/NF-Y/histone protein {ECO:0000313|EMBL:KHO47241.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
archaeal histone
Displaying 16 items

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