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S_p2_S4_coassembly_k141_596281

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_596281_1
AR15, Woesearchaeaota, DPANN, Archaea

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1..834
DNA (834bp) protein (278aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S_p2_S4_coassembly_k141_596281_2
unknown

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782..883
DNA (102bp) protein (34aa)

This feature has no annotations

S_p2_S4_coassembly_k141_596281_3
unknown

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880..1149
DNA (270bp) protein (90aa)

This feature has no annotations

S_p2_S4_coassembly_k141_596281_4

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1293..2618
DNA (1326bp) protein (442aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60983.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S_p2_S4_coassembly_k141_596281_5
unknown

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2694..3089
DNA (396bp) protein (132aa)

This feature has no annotations

S_p2_S4_coassembly_k141_596281_6
AR9, Woesearchaeaota, DPANN, Archaea

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3774..4115
DNA (342bp) protein (114aa)
Tax=AR9
S_p2_S4_coassembly_k141_596281_7
AR9, Woesearchaeaota, DPANN, Archaea

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4102..4479
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46GD3_METBF
hypothetical protein
Tax=AR9
S_p2_S4_coassembly_k141_596281_8
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4899..5363
DNA (465bp) protein (155aa)
Transposase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YW6_METBU
transposase
Transposase {ECO:0000313|EMBL:ABE51360.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
S_p2_S4_coassembly_k141_596281_9
unknown

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comp(5364..5849)
DNA (486bp) protein (162aa)

This feature has no annotations

S_p2_S4_coassembly_k141_596281_10
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5895..7313)
DNA (1419bp) protein (473aa)
Polysaccharide biosynthesis protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2R9B7_METFO
lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)
Tax=CG_Delta_05
S_p2_S4_coassembly_k141_596281_11
R_WOR_2_41_12, WOR-2, Bacteria

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7403..8449
DNA (1047bp) protein (349aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rfaF; ADP-heptose--LPS heptosyltransferase II RfaF
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
S_p2_S4_coassembly_k141_596281_12
CG_Arma_02, Armatimonadetes, Bacteria

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8446..9495
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFW1_9BACT
hypothetical protein
Tax=CG_Arma_02
S_p2_S4_coassembly_k141_596281_13
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9476..10690
DNA (1215bp) protein (405aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003800D20
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
S_p2_S4_coassembly_k141_596281_14
R_OP11_Curtissbacteria_40_11, Curtissbacteria, Microgenomates, Bacteria

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comp(10691..11407)
DNA (717bp) protein (239aa)
glycosyl transferase family 2 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_OP11_Curtissbacteria_40_11_curated
S_p2_S4_coassembly_k141_596281_15
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

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comp(11419..12882)
DNA (1464bp) protein (488aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI000347B1ED
hypothetical protein
Tax=BJP_08E140C01_Elusimicrobia_64_11
S_p2_S4_coassembly_k141_596281_16
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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12940..14556
DNA (1617bp) protein (539aa)
id=3789898 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
S_p2_S4_coassembly_k141_596281_17
GWA1_OP11_40_16_partial, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

14612..15838
DNA (1227bp) protein (409aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:KKR51408.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWA1_40_16.;"
S_p2_S4_coassembly_k141_596281_18
GWA2_OD1_43_9, Magasanikbacteria, Parcubacteria, Bacteria

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15835..16800
DNA (966bp) protein (322aa)
NDP-sugar dehydratase or epimerase Tax=Neptuniibacter caesariensis RepID=Q2BI20_NEPCE
NDP-sugar dehydratase or epimerase {ECO:0000313|EMBL:KKT25438.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_43_9.;"
Epimerase family protein
S_p2_S4_coassembly_k141_596281_19
R_OD1_Magasanikbacteria_47_8, Magasanikbacteria, Parcubacteria, Bacteria

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16815..18029
DNA (1215bp) protein (405aa)
Putative Methyltransferase bin=GWA2_CPR4_42_17 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Magasanikbacteria_47_8_curated
S_p2_S4_coassembly_k141_596281_20
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18031..18888
DNA (858bp) protein (286aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PV10_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHE93041.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
aldo/keto reductase
S_p2_S4_coassembly_k141_596281_21
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

18900..19661
DNA (762bp) protein (254aa)
glycosyl transferase family protein bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
b-glycosyltransferase
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
S_p2_S4_coassembly_k141_596281_22
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

19695..20786
DNA (1092bp) protein (364aa)
mag:amb0139 nucleoside-diphosphate-sugar epimerase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative NAD-dependent epimerase/dehydratase (EC:4.1.1.35)
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KKU86969.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_47_9.;"
S_p2_S4_coassembly_k141_596281_23

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comp(20937..22157)
DNA (1221bp) protein (407aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2D8F6_9BACT
Methyltransferase {ECO:0000313|EMBL:KHO55484.1}; species="Archaea.;" source="archaeon GW2011_AR19.;"
C-methyltransferase
S_p2_S4_coassembly_k141_596281_24

Not on your lists

comp(22162..22875)
DNA (714bp) protein (238aa)
Glycosyl transferase, family 2 Tax=Planctomyces maris DSM 8797 RepID=A6C920_9PLAN
Marine sediment metagenome DNA, contig: S01H1_L01227 {ECO:0000313|EMBL:GAF76793.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p2_S4_coassembly_k141_596281_25
R_OP11_Woesebacteria_38_26b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

23088..24545
DNA (1458bp) protein (486aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26b_curated
S_p2_S4_coassembly_k141_596281_26
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

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comp(24524..25654)
DNA (1131bp) protein (377aa)
Glycosyltransferase bin=GWA1_Kazan_50_15 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
group 1 glycosyl transferase
Tax=RBG_13_Chloroflexi_54_8_curated
S_p2_S4_coassembly_k141_596281_27
AR20, Woesearchaeaota, DPANN, Archaea

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comp(25659..26354)
DNA (696bp) protein (232aa)
Glycosyl transferase family 2 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VR63_METIM bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyl transferase family 2
Tax=AR20
S_p2_S4_coassembly_k141_596281_28

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comp(26364..27356)
DNA (993bp) protein (331aa)
oxidoreductase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B57CB1
Uncharacterized protein {ECO:0000313|EMBL:KKN20788.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
oxidoreductase domain-containing protein
S_p2_S4_coassembly_k141_596281_29
R_Omnitrophica_44_11, Omnitrophica, Bacteria

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27438..27821
DNA (384bp) protein (128aa)
Putative uncharacterized protein bin=GWA2_OP3_52_12 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
S_p2_S4_coassembly_k141_596281_30
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27874..28971
DNA (1098bp) protein (366aa)
UDP-N-acetylglucosamine 2-epimerase Tax=Caldithrix abyssi DSM 13497 RepID=H1XS93_9BACT
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KJS00830.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
UDP-N-acetylglucosamine 2-epimerase
Displaying items 1-30 of 62 in total

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