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S_p2_S4_coassembly_k141_1551210

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1551210_1

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comp(2..646)
DNA (645bp) protein (215aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KHO53019.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
S_p2_S4_coassembly_k141_1551210_2
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(643..1269)
DNA (627bp) protein (209aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 = ATCC 51263.;"
Orotate phosphoribosyltransferase Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S0KIH3_9ENTE
pyrE; hypothetical protein
S_p2_S4_coassembly_k141_1551210_3

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comp(1259..2464)
DNA (1206bp) protein (402aa)
Amidohydrolase family protein Tax=Leptotrichia goodfellowii F0264 RepID=D0GKJ3_9FUSO
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydroorotase
S_p2_S4_coassembly_k141_1551210_4
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

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comp(2466..2759)
DNA (294bp) protein (98aa)
Tax=RBG_13_Euryarchaeota_31_8_curated
S_p2_S4_coassembly_k141_1551210_5
AR6, Pacearchaeaota, DPANN, Archaea

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2850..3179
DNA (330bp) protein (110aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B1020
hypothetical protein
Tax=AR6
S_p2_S4_coassembly_k141_1551210_6
unknown

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comp(3183..3512)
DNA (330bp) protein (110aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1551210_7
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3587..4402)
DNA (816bp) protein (272aa)
Dihydroorotate oxidase (Dihydroorotate dehydrogenase B) electron-transfer subunit {ECO:0000313|EMBL:KHE92222.1}; EC=1.3.98.1 {ECO:0000313|EMBL:KHE92222.1};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
pyrK; dihydroorotate dehydrogenase electron transfer subunit PyrK (EC:1.3.98.1)
PyrK: dihydroorotate dehydrogenase electron transfer subunit Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHL2_DESTT
S_p2_S4_coassembly_k141_1551210_8

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comp(4395..5297)
DNA (903bp) protein (301aa)
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_1551210_9

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comp(5305..5838)
DNA (534bp) protein (178aa)
Aspartate carbamoyltransferase regulatory chain Tax=Pyrococcus sp. ST04 RepID=I3RDN3_9EURY
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; species="Archaea.;" source="archaeon GW2011_AR11.;"
aspartate carbamoyltransferase regulatory subunit
S_p2_S4_coassembly_k141_1551210_10

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comp(6050..6814)
DNA (765bp) protein (255aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; species="Archaea.;" source="archaeon GW2011_AR11.;"
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=PYRB_THEKO
S_p2_S4_coassembly_k141_1551210_11
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6973..8373
DNA (1401bp) protein (467aa)
Leucine dehydrogenase Tax=Lysinibacillus sphaericus (strain C3-41) RepID=B1HRW1_LYSSC
leucine dehydrogenase
Leucine dehydrogenase {ECO:0000313|EMBL:EWH32935.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus CBAM5.;"
S_p2_S4_coassembly_k141_1551210_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8376..8927)
DNA (552bp) protein (184aa)
Putative signal transduction protein with CBS domains Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXK7_METFV
signal transduction protein with cbs domains
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1551210_13
CG_Woesearch_03, Woesearchaeota, Archaea

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9062..9358
DNA (297bp) protein (99aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035FC8D5
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_1551210_14
CG_Woesearch_03, Woesearchaeota, Archaea

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9441..9710
DNA (270bp) protein (90aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003653549
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_1551210_15
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

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9717..9920
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterised protein family UPF0175 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
S_p2_S4_coassembly_k141_1551210_16
unknown

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10023..10514
DNA (492bp) protein (164aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1551210_17
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10536..12440)
DNA (1905bp) protein (635aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Minimal nucleotidyltransferase fused to HEPN protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1551210_18

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12572..12766
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50117.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein
id=5103338 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Displaying 18 items

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