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S_p2_S4_coassembly_k141_3830473

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3830473_1
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1194
DNA (1194bp) protein (398aa)
Putative class-V aminotransferase Tax=Burkholderia glumae (strain BGR1) RepID=C5AF98_BURGB
class-V aminotransferase
Putative class-V aminotransferase {ECO:0000313|EMBL:ACR28505.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
S_p2_S4_coassembly_k141_3830473_2
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1272..1952)
DNA (681bp) protein (227aa)
nitroreductase bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
nitroreductase family protein
Tax=AR11
S_p2_S4_coassembly_k141_3830473_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2033..3799
DNA (1767bp) protein (589aa)
DNA ligase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP-dependent DNA ligase
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_3830473_4
AR13, Pacearchaeaota, DPANN, Archaea

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3818..4369
DNA (552bp) protein (184aa)
hypothetical protein
Uncharacterized protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR13
S_p2_S4_coassembly_k141_3830473_5
unknown

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comp(4355..4519)
DNA (165bp) protein (55aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_6
unknown

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4683..4925
DNA (243bp) protein (81aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_7
AR11, Woesearchaeaota, DPANN, Archaea

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5011..5445
DNA (435bp) protein (145aa)
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S_p2_S4_coassembly_k141_3830473_8

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5506..8187
DNA (2682bp) protein (894aa)
Pk-cdcA protein Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A499_THESM
Transitional endoplasmic reticulum ATPase {ECO:0000313|EMBL:KHO51612.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
cell division protein CDC48
S_p2_S4_coassembly_k141_3830473_9
AR11, Woesearchaeaota, DPANN, Archaea

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8998..10293
DNA (1296bp) protein (432aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
asnA; glutamyl-tRNA(Gln) amidotransferase subunit D
Tax=AR11
S_p2_S4_coassembly_k141_3830473_10
AR10, Diapherotrites, DPANN, Archaea

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comp(10295..10741)
DNA (447bp) protein (149aa)
Transcription regulator, Lrp/AsnC family
Transcription regulator, Lrp/AsnC family bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_3830473_11
unknown

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10901..11767
DNA (867bp) protein (289aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_12
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

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11837..13036
DNA (1200bp) protein (400aa)
Asparaginase Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RWP2_LEAB4
asparaginase
Tax=RBG_13_OP11_40_15_curated
S_p2_S4_coassembly_k141_3830473_13
unknown

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13038..13640
DNA (603bp) protein (201aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_14
unknown

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13677..14204
DNA (528bp) protein (176aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_15
unknown

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14212..14604
DNA (393bp) protein (131aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14702..15400)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG49_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC39069.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23).;"
S_p2_S4_coassembly_k141_3830473_17
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(15397..16044)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG48_HALWC
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCC39068.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23).;"
S_p2_S4_coassembly_k141_3830473_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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16130..16273
DNA (144bp) protein (48aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_3830473_19
unknown

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16277..16369
DNA (93bp) protein (31aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_20
AR19, Pacearchaeaota, DPANN, Archaea

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16422..16940
DNA (519bp) protein (173aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR19
S_p2_S4_coassembly_k141_3830473_21
AR19, Pacearchaeaota, DPANN, Archaea

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16934..17212
DNA (279bp) protein (93aa)
Tax=AR19
S_p2_S4_coassembly_k141_3830473_22
unknown

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17212..17352
DNA (141bp) protein (47aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3830473_23
AR11, Woesearchaeaota, DPANN, Archaea

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17349..18788
DNA (1440bp) protein (480aa)
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glutamyl-tRNA(Gln) amidotransferase subunit E
Tax=AR11
S_p2_S4_coassembly_k141_3830473_24
AR11, Woesearchaeaota, DPANN, Archaea

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18853..19095
DNA (243bp) protein (81aa)
Putative uncharacterized protein bin=GWA2_OP3_53_43 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=AR11
S_p2_S4_coassembly_k141_3830473_25

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comp(19096..19818)
DNA (723bp) protein (241aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
Marine sediment metagenome DNA, contig: S01H1_S06148 {ECO:0000313|EMBL:GAG12646.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative transcriptional regulator
S_p2_S4_coassembly_k141_3830473_26
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

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19917..20921
DNA (1005bp) protein (335aa)
Putative ABC transporter, substrate binding protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ27582.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_37_14.;"
ABC transporter substrate-binding protein
S_p2_S4_coassembly_k141_3830473_27
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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20924..21664
DNA (741bp) protein (247aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000344EB5D
ABC transporter related {ECO:0000313|EMBL:CBN57149.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
ABC transporter-like protein
S_p2_S4_coassembly_k141_3830473_28
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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21665..22408
DNA (744bp) protein (248aa)
ABC transporter, permease protein, putative Tax=Synechococcus sp. PCC 7335 RepID=B4WPV9_9SYNE
ABC transporter, permease protein, putative {ECO:0000313|EMBL:EDX83850.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
putative ABC transporter, permease protein
Displaying 28 items

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