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S_p2_S4_coassembly_k141_179576

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_179576_1

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comp(1..393)
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S03H2_L00255 {ECO:0000313|EMBL:GAH34612.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K07561 diphthamide synthase subunit DPH2 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
diphthine synthase, DPH2 subunit
S_p2_S4_coassembly_k141_179576_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(436..1029)
DNA (594bp) protein (198aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_179576_3
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1026..1463)
DNA (438bp) protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_179576_4
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1503..1919)
DNA (417bp) protein (139aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
NusA protein homolog
Tax=AR11
S_p2_S4_coassembly_k141_179576_5

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comp(1924..2193)
DNA (270bp) protein (90aa)
Ribosomal protein L30e (RP-L30e, RPL30) {ECO:0000313|EMBL:AIF00801.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
hypothetical protein; K02908 large subunit ribosomal protein L30e bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L30e
S_p2_S4_coassembly_k141_179576_6
AR11, Woesearchaeaota, DPANN, Archaea

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comp(2183..3319)
DNA (1137bp) protein (379aa)
DNA-directed RNA polymerase subunit A'' bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
Tax=AR11
S_p2_S4_coassembly_k141_179576_7

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comp(3324..5954)
DNA (2631bp) protein (877aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
S_p2_S4_coassembly_k141_179576_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(5960..7762)
DNA (1803bp) protein (601aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=AR11
S_p2_S4_coassembly_k141_179576_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(7762..9246)
DNA (1485bp) protein (495aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=AR4
S_p2_S4_coassembly_k141_179576_10
nanoarchaeote Nst1, Nanoarchaeota, Archaea

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comp(9239..9496)
DNA (258bp) protein (86aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
DNA-directed RNA polymerase subunit H Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH
DNA-directed RNA polymerase, subunit H
S_p2_S4_coassembly_k141_179576_trna_1
unknown

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comp(9944..10069)
DNA (126bp)
transferRNA Tyr
S_p2_S4_coassembly_k141_179576_11

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comp(10103..11674)
DNA (1572bp) protein (524aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53503.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
transmembrane_regions bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S_p2_S4_coassembly_k141_179576_12

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11770..12636
DNA (867bp) protein (289aa)
phosphoribosylpyrophosphate synthetase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KHO53887.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KHO53887.1};; species="Archaea.;" source="archaeon GW2011_AR18.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
S_p2_S4_coassembly_k141_179576_13
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(12633..14060)
DNA (1428bp) protein (476aa)
Proline--tRNA ligase Tax=Thermoplasmatales archaeon I-plasma RepID=T0MNG2_9EURY
Proline-tRNA ligase
Tax=CG_Pacearch_03
S_p2_S4_coassembly_k141_179576_14
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

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comp(14057..15160)
DNA (1104bp) protein (368aa)
Glutamate 5-kinase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8T9_METEZ
glutamate 5-kinase
Tax=BJP_IG2158_Planctomycetes_45_10
S_p2_S4_coassembly_k141_179576_15
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(15148..16452)
DNA (1305bp) protein (435aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
Gamma-glutamyl phosphate reductase Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RQD7_SPITD
gamma-glutamyl phosphate reductase
S_p2_S4_coassembly_k141_179576_16

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comp(16445..16621)
DNA (177bp) protein (59aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWJ2_9CYAN
Marine sediment metagenome DNA, contig: S01H1_S05363 {ECO:0000313|EMBL:GAG03789.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 17 items

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