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S_p2_S4_coassembly_k141_1231906

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1231906_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2..1318
DNA (1317bp) protein (439aa)
cell division control protein 6; K10725 archaeal cell division control protein 6 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ORC1-type DNA replication protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_1231906_2
CG_Woesearch_02, Woesearchaeota, Archaea

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1323..2783
DNA (1461bp) protein (487aa)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1231906_3
CG_Woesearch_02, Woesearchaeota, Archaea

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2780..6322
DNA (3543bp) protein (1181aa)
DNA polymerase II large subunit bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase II large subunit
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1231906_4

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comp(6312..6602)
DNA (291bp) protein (97aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61430.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S_p2_S4_coassembly_k141_1231906_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6599..7003)
DNA (405bp) protein (135aa)
translation initiation factor IF-2 subunit beta; K03238 translation initiation factor 2 subunit 2 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 2 subunit beta
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_1231906_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(7060..7692)
DNA (633bp) protein (211aa)
Nucleic acid-binding, OB-fold-like bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_1231906_7

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comp(7652..11239)
DNA (3588bp) protein (1196aa)
Uncharacterized protein Tax=Thermococcus litoralis DSM 5473 RepID=H3ZQ49_THELI
DNA replication helicase protein MCM {ECO:0000313|EMBL:KHO53132.1}; species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
S_p2_S4_coassembly_k141_1231906_8

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comp(11298..11849)
DNA (552bp) protein (184aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; species="Archaea.;" source="archaeon GW2011_AR3.;"
TATA-box-binding protein
S_p2_S4_coassembly_k141_1231906_9
unknown

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12085..12327
DNA (243bp) protein (81aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1231906_10
CG_Woesearch_01, Woesearchaeota, Archaea

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12314..12691
DNA (378bp) protein (126aa)
id=5048320 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_1231906_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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12783..15014
DNA (2232bp) protein (744aa)
Putative uncharacterized protein Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RI95_ARCPA
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p2_S4_coassembly_k141_1231906_12
unknown

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15080..15310
DNA (231bp) protein (77aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1231906_13
unknown

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15387..15821
DNA (435bp) protein (145aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1231906_14
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(15807..17363)
DNA (1557bp) protein (519aa)
(R)-citramalate synthase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARF0_PELPD
putative alpha-isopropylmalate/homocitrate synthase family transferase
Tax=CG_Woesearch_03
S_p2_S4_coassembly_k141_1231906_15
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17522..17896)
DNA (375bp) protein (125aa)
Type 4 fimbriae expression regulatory protein pilR Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7L1_9BURK
Fis family transcriptional regulator
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S_p2_S4_coassembly_k141_1231906_16
unknown

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comp(17900..18406)
DNA (507bp) protein (169aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1231906_17
unknown

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comp(18486..19217)
DNA (732bp) protein (244aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1231906_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

19633..20433
DNA (801bp) protein (267aa)
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_1231906_19

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comp(20884..21075)
DNA (192bp) protein (64aa)
id=3230411 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
Uncharacterized protein {ECO:0000313|EMBL:KKW24897.1}; species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
hypothetical protein
S_p2_S4_coassembly_k141_1231906_20

Not on your lists

comp(21065..21886)
DNA (822bp) protein (274aa)
id=3230410 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
Uncharacterized protein {ECO:0000313|EMBL:KKW26207.1}; species="Bacteria.;" source="bacterium GW2011_GWB1_52_7.;"
hypothetical protein
S_p2_S4_coassembly_k141_1231906_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

22029..22226
DNA (198bp) protein (66aa)
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S_p2_S4_coassembly_k141_1231906_22
unknown

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comp(22238..22918)
DNA (681bp) protein (227aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1231906_trna_1
unknown

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comp(22963..23035)
DNA (73bp)
transferRNA His
Displaying 23 items

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