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S35_SO-1_scaffold_68235

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_68235_1

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1..2094
DNA (2094bp) protein (698aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
S35_SO-1_scaffold_68235_2
AR11, Woesearchaeaota, DPANN, Archaea

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2250..2534
DNA (285bp) protein (95aa)
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30e
Tax=AR11
S35_SO-1_scaffold_68235_3

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2561..2947
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
hypothetical protein
S35_SO-1_scaffold_68235_4

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3006..3443
DNA (438bp) protein (146aa)
30S ribosomal protein S12 {ECO:0000256|RuleBase:RU004490}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
S35_SO-1_scaffold_68235_5
CG_Woesearch_02, Woesearchaeota, Archaea

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3756..4355
DNA (600bp) protein (200aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5043965 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
Tax=CG_Woesearch_02
S35_SO-1_scaffold_68235_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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4400..4975
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A24
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_68235_7
CG_Woesearch_03, Woesearchaeota, Archaea

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4962..5162
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365353A
Tax=CG_Woesearch_03
S35_SO-1_scaffold_68235_8
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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5333..6358
DNA (1026bp) protein (342aa)
hypothetical protein, partial n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036F83F3
Uncharacterized protein {ECO:0000313|EMBL:KKP27972.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
S35_SO-1_scaffold_68235_9
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

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6407..7876
DNA (1470bp) protein (490aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A6DF5
Tax=RBG_13_RIF_OD1_07_42_11_curated
S35_SO-1_scaffold_68235_10
GWC2_OD1_52_8, Kaiserbacteria, Parcubacteria, Bacteria

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7848..9467
DNA (1620bp) protein (540aa)
Quinonprotein alcohol dehydrogenase {ECO:0000313|EMBL:KKW29490.1}; TaxID=1618676 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWC2_52_8b.;"
Pyrrolo-quinoline quinone id=2563241 bin=GWF1_Spirochaetes_51_8 species=Thermoplasmatales archaeon SCGC AB-539-C06 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
WD40-like repeat protein
S35_SO-1_scaffold_68235_11
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9464..10009
DNA (546bp) protein (182aa)
Cytochrome c biogenesis protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DBJ3_9BACL
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EMT53649.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
ahpC/TSA family protein
S35_SO-1_scaffold_68235_12
unknown

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10049..11140
DNA (1092bp) protein (364aa)

This feature has no annotations

S35_SO-1_scaffold_68235_13
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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11203..12936
DNA (1734bp) protein (578aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICJ0_METNO
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
S35_SO-1_scaffold_68235_14
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

12979..13389
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GTU3_9BACT
putative acetyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
S35_SO-1_scaffold_68235_15
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13392..15326)
DNA (1935bp) protein (645aa)
Intein C-terminal splicing region domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0G4_9BACT
Intein C-terminal splicing region domain protein {ECO:0000313|EMBL:EAY23878.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
YD repeat protein
S35_SO-1_scaffold_68235_16

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15433..16698
DNA (1266bp) protein (422aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G4H8_SORC5
Uncharacterized protein {ECO:0000313|EMBL:KHO51328.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
S35_SO-1_scaffold_68235_17
AR11, Woesearchaeaota, DPANN, Archaea

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16704..17039
DNA (336bp) protein (112aa)
Tax=AR11
S35_SO-1_scaffold_68235_18
AR11, Woesearchaeaota, DPANN, Archaea

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17041..17433
DNA (393bp) protein (131aa)
Tax=AR11
S35_SO-1_scaffold_68235_19
AR11, Woesearchaeaota, DPANN, Archaea

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17692..18225
DNA (534bp) protein (178aa)
id=5045804 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
S35_SO-1_scaffold_68235_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18213..19193
DNA (981bp) protein (327aa)
Tax=AR11
S35_SO-1_scaffold_68235_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

19255..19710
DNA (456bp) protein (152aa)
seg id=5044203 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_68235_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

19717..20685
DNA (969bp) protein (323aa)
id=5045807 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
S35_SO-1_scaffold_68235_23

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20917..22374
DNA (1458bp) protein (486aa)
Archaeal flagellar protein FlaI {ECO:0000313|EMBL:KHO50886.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
type II/IV secretion system ATPase; K07332 archaeal flagellar protein FlaI id=5045808 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Secretory protein kinase
S35_SO-1_scaffold_68235_24

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22367..23185
DNA (819bp) protein (273aa)
Type II secretion system protein {ECO:0000313|EMBL:KHO50885.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein; K07333 archaeal flagellar protein FlaJ id=5044200 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Type II secretion system protein
S35_SO-1_scaffold_68235_25
AR11, Woesearchaeaota, DPANN, Archaea

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23185..24210
DNA (1026bp) protein (342aa)
gspF2; type II secretion system protein F GspF2 id=5044199 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Type II secretion system protein F GspF2
Tax=AR11
S35_SO-1_scaffold_68235_26
unknown

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24282..24503
DNA (222bp) protein (74aa)

This feature has no annotations

S35_SO-1_scaffold_68235_27
AR11, Woesearchaeaota, DPANN, Archaea

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24457..24987
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=5045332 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_68235_28
AR11, Woesearchaeaota, DPANN, Archaea

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25050..25514
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=5050194 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
S35_SO-1_scaffold_68235_29
AR11, Woesearchaeaota, DPANN, Archaea

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25492..25953
DNA (462bp) protein (154aa)
Tax=AR11
S35_SO-1_scaffold_68235_30
AR11, Woesearchaeaota, DPANN, Archaea

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26194..26598
DNA (405bp) protein (135aa)
hypothetical protein
Tax=AR11
Displaying items 1-30 of 40 in total

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