ggKbase home page

S35_SO-1_scaffold_22387

Search features with annotation key words

Displaying items 1-30 of 265 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_22387_1
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..554)
DNA (552bp) protein (184aa)
hypothetical protein
id=5103575 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S35_SO-1_scaffold_22387_2
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

682..1806
DNA (1125bp) protein (375aa)
Integrase catalytic region id=5046599 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative integrase family protein
Tax=AR4
S35_SO-1_scaffold_22387_3
unknown

Not on your lists

comp(1787..2086)
DNA (300bp) protein (100aa)

This feature has no annotations

S35_SO-1_scaffold_22387_4

Not on your lists

comp(2358..6017)
DNA (3660bp) protein (1220aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51466.1}; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Peptidase S8/S53 id=4688818 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
S35_SO-1_scaffold_22387_5
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(6074..6250)
DNA (177bp) protein (59aa)
id=2920181 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWD1_Spirochaetes_27_9_curated
S35_SO-1_scaffold_22387_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6276..7196)
DNA (921bp) protein (307aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY id=5103042 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Signal peptide peptidase SppA, 36K type
Tax=AR11
S35_SO-1_scaffold_22387_7
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7196..7393)
DNA (198bp) protein (66aa)
Tax=AR17
S35_SO-1_scaffold_22387_8

Not on your lists

comp(7405..7905)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52427.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5046579 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S35_SO-1_scaffold_22387_9

Not on your lists

7987..8331
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Translation initiation factor 1A
S35_SO-1_scaffold_22387_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8385..8987
DNA (603bp) protein (201aa)
Extracellular nuclease n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WRM0_METH6
Extracellular nuclease
Tax=CG_Woesearch_02
S35_SO-1_scaffold_22387_11
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9210..9653)
DNA (444bp) protein (148aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000255|HAMAP-Rule:MF_00161}; EC=3.4.23.36 {ECO:0000255|HAMAP-Rule:MF_00161};; Prolipoprotein signal peptidase {ECO:0000255|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000255|HAMAP-Rule:MF_00161}; Short=SPase II {ECO:0000255|HAMAP-Rule:MF_00161};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
Lipoprotein signal peptidase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=LSPA_HALOH
S35_SO-1_scaffold_22387_12
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(9689..10087)
DNA (399bp) protein (133aa)
seg id=5800683 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
S35_SO-1_scaffold_22387_13
unknown

Not on your lists

comp(10140..10301)
DNA (162bp) protein (54aa)

This feature has no annotations

S35_SO-1_scaffold_22387_14
unknown

Not on your lists

comp(10305..10472)
DNA (168bp) protein (56aa)

This feature has no annotations

S35_SO-1_scaffold_22387_15
unknown

Not on your lists

comp(10508..11356)
DNA (849bp) protein (283aa)

This feature has no annotations

S35_SO-1_scaffold_22387_16
unknown

Not on your lists

11449..11796
DNA (348bp) protein (116aa)

This feature has no annotations

S35_SO-1_scaffold_22387_17

Not on your lists

comp(11793..12173)
DNA (381bp) protein (127aa)
30S ribosomal protein S8e n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RS8E_METTP
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S8e
S35_SO-1_scaffold_22387_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

12240..12668
DNA (429bp) protein (143aa)
hypothetical protein id=5042332 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_22387_19

Not on your lists

12730..12957
DNA (228bp) protein (76aa)
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Small nuclear ribonucleoprotein {ECO:0000313|EMBL:KHO45360.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Like-Sm ribonucleoprotein core
S35_SO-1_scaffold_22387_20
Caldisphaera lagunensis, Caldisphaera, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

12976..13143
DNA (168bp) protein (56aa)
50S ribosomal protein L37e n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0AAU3_CALLD
ribosomal protein L37E
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=1056495 species="Archaea; Crenarchaeota; Thermoprotei; Acidilobales; Caldisphaeraceae; Caldisphaera.;" source="Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154).;"
S35_SO-1_scaffold_22387_21
unknown

Not on your lists

13633..13833
DNA (201bp) protein (67aa)

This feature has no annotations

S35_SO-1_scaffold_22387_22
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(14152..14301)
DNA (150bp) protein (50aa)
hypothetical protein
hypothetical protein id=14427386 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CG_Elusi_05
S35_SO-1_scaffold_22387_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14470..15168)
DNA (699bp) protein (233aa)
hypothetical protein
HAD superfamily (subfamily IA) hydrolase, TIGR02253; K07025 putative hydrolase of the HAD superfamily id=5241563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR11
S35_SO-1_scaffold_22387_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

15313..16383
DNA (1071bp) protein (357aa)
Putative leucyl aminopeptidase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIM9_THEBM
leucyl aminopeptidase
Tax=AR11
S35_SO-1_scaffold_22387_25
unknown

Not on your lists

comp(16384..16482)
DNA (99bp) protein (33aa)

This feature has no annotations

S35_SO-1_scaffold_22387_26

Not on your lists

16685..17029
DNA (345bp) protein (115aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5043642 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-tRNA hydrolase, PTH2 family {ECO:0000313|EMBL:KHO46618.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KHO46618.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Peptidyl-tRNA hydrolase
S35_SO-1_scaffold_22387_27
unknown

Not on your lists

comp(17063..17341)
DNA (279bp) protein (93aa)

This feature has no annotations

S35_SO-1_scaffold_22387_trna_1
unknown

Not on your lists

17420..17494
DNA (75bp)
transferRNA Lys
S35_SO-1_scaffold_22387_28
GWF2_OD1_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17605..17790)
DNA (186bp) protein (62aa)
hypothetical protein (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=16663 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKR32524.1}; TaxID=1618642 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_39_8.;"
hypothetical protein
S35_SO-1_scaffold_22387_29
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17855..18523)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003645D7C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK80590.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Displaying items 1-30 of 265 in total

View Taxonomy