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S35_SO-1_scaffold_312524

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_312524_1
GWC1_OP11_47_15, Amesbacteria, Microgenomates, Bacteria

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1..714
DNA (714bp) protein (238aa)
Type IV secretory pathway VirB4 component-like protein {ECO:0000313|EMBL:KKU62565.1}; TaxID=1618364 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC1_47_15.;"
Type IV secretory pathway VirB4 components-like protein id=2002811 bin=GWE2_CPR3_35_7 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
hypothetical protein
S35_SO-1_scaffold_312524_2
unknown

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1215..2618
DNA (1404bp) protein (468aa)

This feature has no annotations

S35_SO-1_scaffold_312524_3
unknown

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comp(2583..3908)
DNA (1326bp) protein (442aa)

This feature has no annotations

S35_SO-1_scaffold_312524_4
unknown

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comp(4002..4826)
DNA (825bp) protein (275aa)

This feature has no annotations

S35_SO-1_scaffold_312524_5
unknown

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5158..5433
DNA (276bp) protein (92aa)

This feature has no annotations

S35_SO-1_scaffold_312524_6
unknown

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5430..5867
DNA (438bp) protein (146aa)

This feature has no annotations

S35_SO-1_scaffold_312524_7
unknown

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6078..6602
DNA (525bp) protein (175aa)

This feature has no annotations

S35_SO-1_scaffold_312524_8
unknown

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6647..6994
DNA (348bp) protein (116aa)

This feature has no annotations

S35_SO-1_scaffold_312524_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6981..7469
DNA (489bp) protein (163aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S35_SO-1_scaffold_312524_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7686..9578)
DNA (1893bp) protein (631aa)
kh-domain/beta-lactamase-domain protein; K07041 id=5044630 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
kh-domain/beta-lactamase-domain-containing protein
Tax=AR11
S35_SO-1_scaffold_312524_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9763..10386)
DNA (624bp) protein (208aa)
proteasome subunit beta; K03433 proteasome beta subunit [EC:3.4.25.1] id=5044631 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Proteasome subunit beta
Tax=CG_Woesearch_02
S35_SO-1_scaffold_312524_12
unknown

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comp(10495..10893)
DNA (399bp) protein (133aa)

This feature has no annotations

S35_SO-1_scaffold_312524_13

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comp(10907..11668)
DNA (762bp) protein (254aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51916.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S35_SO-1_scaffold_312524_14

Not on your lists

comp(11791..12846)
DNA (1056bp) protein (352aa)
Outer membrane adhesin like protein proteiin {ECO:0000313|EMBL:KHO52075.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S35_SO-1_scaffold_312524_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12895..13644)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037EB6CE
membrane protein
Tax=AR11
S35_SO-1_scaffold_312524_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13696..14271
DNA (576bp) protein (192aa)
Putative uncharacterized protein PH0730 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58461_PYRHO
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_312524_17

Not on your lists

14274..15143
DNA (870bp) protein (290aa)
phosphoribosyl transferase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=5042287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KHO46785.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KHO46785.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
S35_SO-1_scaffold_312524_18
unknown

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15191..15610
DNA (420bp) protein (140aa)

This feature has no annotations

S35_SO-1_scaffold_312524_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(15612..17165)
DNA (1554bp) protein (518aa)
Bifunctional aminoacyl-tRNA synthetase (Fragment) id=5800815 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
prolyl-tRNA synthetase
Tax=CG_Woesearch_02
S35_SO-1_scaffold_312524_20
unknown

Not on your lists

17263..17682
DNA (420bp) protein (140aa)

This feature has no annotations

S35_SO-1_scaffold_312524_21
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17870..18454)
DNA (585bp) protein (195aa)
Membrane protein, MarC family n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJY9_METFS
membrane protein, MarC family
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
S35_SO-1_scaffold_312524_22
unknown

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comp(18467..18661)
DNA (195bp) protein (65aa)

This feature has no annotations

S35_SO-1_scaffold_312524_23
unknown

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comp(18658..19083)
DNA (426bp) protein (142aa)

This feature has no annotations

S35_SO-1_scaffold_312524_24

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comp(19221..20147)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003704509
Marine sediment metagenome DNA, contig: S01H1_S09303 {ECO:0000313|EMBL:GAG03678.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
serine protease MucD
S35_SO-1_scaffold_312524_25
unknown

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comp(20144..20443)
DNA (300bp) protein (100aa)

This feature has no annotations

S35_SO-1_scaffold_312524_26
AR18, Woesearchaeaota, DPANN, Archaea

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comp(20440..20829)
DNA (390bp) protein (130aa)
id=5046837 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S35_SO-1_scaffold_312524_27

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comp(21026..21304)
DNA (279bp) protein (93aa)
Marine sediment metagenome DNA, contig: S01H1_S07743 {ECO:0000313|EMBL:GAG01145.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5044188 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA/RNA-binding protein Alba
S35_SO-1_scaffold_312524_28
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21415..22650)
DNA (1236bp) protein (412aa)
hypothetical protein id=5045990 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_312524_29

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comp(22652..24310)
DNA (1659bp) protein (553aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=5050148 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Arginyl-tRNA synthetase
S35_SO-1_scaffold_312524_30
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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comp(24335..24967)
DNA (633bp) protein (211aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Thermincola potens (strain JR) RepID=D5X7R0_THEPJ
3,4-dihydroxy-2-butanone 4-phosphate synthase
Tax=RBG_13_Chloroflexi_46_9_curated
Displaying items 1-30 of 48 in total

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