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S35_SO-1_scaffold_611283

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_611283_1

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187..2037
DNA (1851bp) protein (617aa)
id=5045888 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46233.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S35_SO-1_scaffold_611283_2

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2040..3530
DNA (1491bp) protein (497aa)
polysaccharide biosynthesis protein CapF id=5045889 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Polysaccharide biosynthesis protein CapF {ECO:0000313|EMBL:KHO46234.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
polysaccharide biosynthesis protein
S35_SO-1_scaffold_611283_3
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3579..5285
DNA (1707bp) protein (569aa)
Sulfatase-domain-containing protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EWR7_CLOTA
sulfatase-domain-containing protein
Sulfatase-domain-containing protein {ECO:0000313|EMBL:CDI49841.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
S35_SO-1_scaffold_611283_4
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5398..6810
DNA (1413bp) protein (471aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor lactoaceticus 6A.;"
Pyruvate kinase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TKQ1_CALOO
pyruvate kinase
S35_SO-1_scaffold_611283_5
unknown

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6812..7882
DNA (1071bp) protein (357aa)

This feature has no annotations

S35_SO-1_scaffold_611283_6
unknown

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7884..8972
DNA (1089bp) protein (363aa)

This feature has no annotations

S35_SO-1_scaffold_611283_7
unknown

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8965..9594
DNA (630bp) protein (210aa)

This feature has no annotations

S35_SO-1_scaffold_611283_8

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9596..10474
DNA (879bp) protein (293aa)
PHP domain protein n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q430_CALOW
Marine sediment metagenome DNA, contig: S01H1_L04787 {ECO:0000313|EMBL:GAF71120.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PHP domain-containing protein
S35_SO-1_scaffold_611283_9

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10484..11020
DNA (537bp) protein (179aa)
Adenylyl-sulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZT7_9CHLR
Marine sediment metagenome DNA, contig: S01H1_L04787 {ECO:0000313|EMBL:GAF71123.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S35_SO-1_scaffold_611283_10

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comp(11060..12052)
DNA (993bp) protein (331aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KWH9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CEG12902.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
polysaccharide biosynthesis protein CapD
S35_SO-1_scaffold_611283_11
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(12049..13158)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CWU5_9BACT
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=CG_Woesearch_01
S35_SO-1_scaffold_611283_12
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13169..13573)
DNA (405bp) protein (135aa)
O-acetyltransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWL6_SYNAS
O-acetyltransferase
Tax=BJP_IG2157_Clostridiales_35_16
S35_SO-1_scaffold_611283_13

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comp(13578..14717)
DNA (1140bp) protein (380aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:CEG12898.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CEG12898.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
UDP-N-acetyl-D-glucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D704_METSW
S35_SO-1_scaffold_611283_14

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comp(14714..15784)
DNA (1071bp) protein (357aa)
N-acetylneuraminate synthase (EC:2.5.1.57)
N-acetylneuraminate synthase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T756_THEIA
Uncharacterized protein {ECO:0000313|EMBL:CEG12897.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
S35_SO-1_scaffold_611283_15

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comp(15781..16494)
DNA (714bp) protein (238aa)
Acylneuraminate cytidylyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D707_METSW
Uncharacterized protein {ECO:0000313|EMBL:KKL11351.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acylneuraminate cytidylyltransferase
S35_SO-1_scaffold_611283_16
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(16491..17531)
DNA (1041bp) protein (347aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase {ECO:0000313|EMBL:ACL70449.1}; EC=2.5.1.56 {ECO:0000313|EMBL:ACL70449.1};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
N-acetylneuraminate synthase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CYT0_HALOH
S35_SO-1_scaffold_611283_17

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comp(17532..18011)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN42517.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5047515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AsnC family transcriptional regulator
S35_SO-1_scaffold_611283_18
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

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18222..18992
DNA (771bp) protein (257aa)
Putative imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Leptospira weilii serovar Topaz str. LT2116 RepID=M3GV21_9LEPT
hisF; hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S35_SO-1_scaffold_611283_19
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

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18979..19641
DNA (663bp) protein (221aa)
Imidazole glycerol phosphate synthase subunit HisH id=4724814 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hisH; imidazole glycerol phosphate synthase subunit HisH
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S35_SO-1_scaffold_611283_20
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

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19638..20876
DNA (1239bp) protein (413aa)
N-acetyl sugar amidotransferase id=15191563 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
pseA; pseudaminic acid biosynthesis protein
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
S35_SO-1_scaffold_611283_21

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20919..22895
DNA (1977bp) protein (659aa)
id=5045897 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46242.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S35_SO-1_scaffold_611283_22

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comp(22879..23658)
DNA (780bp) protein (260aa)
Marine sediment metagenome DNA, contig: S01H1_L01575 {ECO:0000313|EMBL:GAF82251.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycosyl transferase family 2 id=1918768 bin=GWD2_Deltaproteobacteria_55_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glycosyl transferase family protein
S35_SO-1_scaffold_611283_23
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

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comp(23774..25309)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000347B1ED
glycosyl transferase family protein
Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
S35_SO-1_scaffold_611283_24
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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25451..25909
DNA (459bp) protein (153aa)
dTDP-4-dehydrorhamnose 3,5-epimerase id=1249725 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
dTDP-4-dehydrorhamnose 3,5 epimerase
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S35_SO-1_scaffold_611283_25
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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25912..26910
DNA (999bp) protein (333aa)
dTDP-glucose 4,6-dehydratase, dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=5241073 bin=GW2011_AR10_complete species=Thermoplasmatales archaeon SCGC AB-539-C06 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=GWA2_Nitrospirae_42_11_curated
S35_SO-1_scaffold_611283_26
CG_Woesearch_01, Woesearchaeota, Archaea

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26988..27716
DNA (729bp) protein (243aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Methanosarcina mazei RepID=Q8PUW2_METMA
Tax=CG_Woesearch_01
S35_SO-1_scaffold_611283_27
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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27751..28857
DNA (1107bp) protein (369aa)
Predicted pyridoxal phosphate-dependent enzyme n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ08_PELTS
WecE; pyridoxal phosphate-dependent enzyme
Tax=RBG_13_OP3X_46_9_curated
S35_SO-1_scaffold_611283_28
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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28910..29593
DNA (684bp) protein (228aa)
Methionine biosynthesis protein MetW n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GNE6_9CYAN
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:EKQ68991.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
type 11 methyltransferase
S35_SO-1_scaffold_611283_29

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comp(29598..30341)
DNA (744bp) protein (248aa)
Marine sediment metagenome DNA, contig: S01H1_S08048 {ECO:0000313|EMBL:GAG04409.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyl transferase id=4638234 bin=GWC2_Methylomirabilis_70_16 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyl transferase family 2
S35_SO-1_scaffold_611283_30
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(30378..31511)
DNA (1134bp) protein (378aa)
Glycosyltransferase id=3639083 bin=GWA1_Kazan_50_15 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADZ08972.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
Displaying items 1-30 of 62 in total

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