ggKbase home page

S35_SO-1_scaffold_204222

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_204222_1
RBG_19FT_COMBO_OP11_43_10_curated, Microgenomates, Bacteria

Not on your lists

comp(2..373)
DNA (372bp) protein (124aa)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003771A36
Tax=RBG_19FT_COMBO_OP11_43_10_curated
S35_SO-1_scaffold_204222_2
unknown

Not on your lists

comp(535..870)
DNA (336bp) protein (112aa)

This feature has no annotations

S35_SO-1_scaffold_204222_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(872..2074)
DNA (1203bp) protein (401aa)
Fe-S cluster assembly protein SufD id=5800092 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
FeS assembly protein SufD
Tax=AR11
S35_SO-1_scaffold_204222_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2240..5419)
DNA (3180bp) protein (1060aa)
FeS assembly protein SufB n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6N7_9BACT
FeS assembly protein SufB
Tax=CG_Anaero_02
S35_SO-1_scaffold_204222_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5514..5912)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PK80_9ZZZZ
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_204222_6
unknown

Not on your lists

6036..6863
DNA (828bp) protein (276aa)

This feature has no annotations

S35_SO-1_scaffold_204222_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

6848..7090
DNA (243bp) protein (81aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_204222_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

7145..8188
DNA (1044bp) protein (348aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6D6_METSL
UBA/THiF-type NAD/FAD binding protein
Tax=AR6
S35_SO-1_scaffold_204222_9
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8454..8741)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVL0_THEON
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S35_SO-1_scaffold_204222_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8835..9788)
DNA (954bp) protein (318aa)
lactate dehydrogenase n=1 Tax=Orenia marismortui RepID=UPI00036C7694
L-lactate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
S35_SO-1_scaffold_204222_11
unknown

Not on your lists

9894..10028
DNA (135bp) protein (45aa)

This feature has no annotations

S35_SO-1_scaffold_204222_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10029..10436)
DNA (408bp) protein (136aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCL7_ANADF
CMP/dCMP deaminase
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S35_SO-1_scaffold_204222_13
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

comp(10627..11193)
DNA (567bp) protein (189aa)
Putative uncharacterized protein (Fragment) n=1 Tax=sediment metagenome RepID=D9PHA1_9ZZZZ
hypothetical protein
Tax=GWA2_OP3X_41_15_curated
S35_SO-1_scaffold_204222_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11251..12540)
DNA (1290bp) protein (430aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S35_SO-1_scaffold_204222_15
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

comp(12553..13005)
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM id=5102990 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional repressor NrdR
Tax=RBG_16_OP11_39_9b_curated
S35_SO-1_scaffold_204222_16
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13118..14140
DNA (1023bp) protein (341aa)
aminopeptidase
aminopeptidase id=5241586 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S35_SO-1_scaffold_204222_17
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

14247..15155
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035FA8DA
hypothetical protein
Tax=GWA2_WOR_2_47_8_curated
S35_SO-1_scaffold_204222_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15384..15851)
DNA (468bp) protein (156aa)
id=5800786 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_204222_19
RBG_13_OP11_Woesebacteria_46_13_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(15913..16398)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E3419
hypothetical protein
Tax=RBG_13_OP11_Woesebacteria_46_13_curated
S35_SO-1_scaffold_204222_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16426..16956)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F3B8D
Tax=CG_Woesearch_02
S35_SO-1_scaffold_204222_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17206..17448)
DNA (243bp) protein (81aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
S35_SO-1_scaffold_204222_22
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17450..17644)
DNA (195bp) protein (65aa)
Succinyl-CoA synthetase (Alpha subunit) n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICE1_ACIB4 id=5103835 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Succinyl-CoA synthetase Alpha subunit
Tax=RBG_13_Pacearchaeota_36_9_curated
S35_SO-1_scaffold_204222_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17688..20831)
DNA (3144bp) protein (1048aa)
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
Tax=AR15
S35_SO-1_scaffold_204222_24
unknown

Not on your lists

20888..21124
DNA (237bp) protein (79aa)

This feature has no annotations

S35_SO-1_scaffold_204222_25
GWA2_OD1_53_7_partial, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

21358..25506
DNA (4149bp) protein (1383aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW36856.1}; TaxID=1618650 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_53_7.;"
S35_SO-1_scaffold_204222_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(25623..26471)
DNA (849bp) protein (283aa)
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
Tax=CG_Woesearch_02
Displaying 26 items

View Taxonomy