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S35_SO-1_scaffold_163540

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_163540_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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61..291
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5042315 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
SSU ribosomal protein S14P
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_163540_2

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301..690
DNA (390bp) protein (130aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=5042316 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps8p; 30S ribosomal protein S8P
S35_SO-1_scaffold_163540_3

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691..1257
DNA (567bp) protein (189aa)
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12027.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6 id=5800047 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L6
S35_SO-1_scaffold_163540_4

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1305..1889
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037197A6
Large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO46816.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ribosomal protein L32e
S35_SO-1_scaffold_163540_5

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1891..2346
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381F97D
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L19e
S35_SO-1_scaffold_163540_6

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2333..2911
DNA (579bp) protein (193aa)
50S ribosomal protein L18P n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL18_NANEQ
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18P
S35_SO-1_scaffold_163540_7

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2904..3782
DNA (879bp) protein (293aa)
30S ribosomal protein S5P, small subunit ribosomal protein S5 {ECO:0000313|EMBL:KHO51233.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
S35_SO-1_scaffold_163540_8
CG_Woesearch_02, Woesearchaeota, Archaea

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3784..4245
DNA (462bp) protein (154aa)
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30P
Tax=CG_Woesearch_02
S35_SO-1_scaffold_163540_9

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4245..4709
DNA (465bp) protein (155aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl15p; 50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=5042323 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L15P
S35_SO-1_scaffold_163540_10
AR11, Woesearchaeaota, DPANN, Archaea

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4741..6168
DNA (1428bp) protein (476aa)
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
Tax=AR11
S35_SO-1_scaffold_163540_11

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6416..7165
DNA (750bp) protein (250aa)
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46823.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S35_SO-1_scaffold_163540_12
AR11, Woesearchaeaota, DPANN, Archaea

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comp(7162..7653)
DNA (492bp) protein (164aa)
Tax=AR11
S35_SO-1_scaffold_163540_13
CG_Woesearch_02, Woesearchaeota, Archaea

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7693..7998
DNA (306bp) protein (102aa)
50S ribosomal protein L34e n=2 Tax=Methanobacterium RepID=K6TYY7_9EURY id=5103277 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L34e
Tax=CG_Woesearch_02
S35_SO-1_scaffold_163540_14
unknown

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comp(8017..8181)
DNA (165bp) protein (55aa)

This feature has no annotations

S35_SO-1_scaffold_163540_15
unknown

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8285..8362
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 15 items

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