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S36_SO-2_scaffold_30542

Search features with annotation key words

Displaying items 1-30 of 378 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_30542_1

Not on your lists

comp(1..141)
DNA (141bp) protein (47aa)
transmembrane_regions id=18248149 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48152.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
S36_SO-2_scaffold_30542_2
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(191..646)
DNA (456bp) protein (152aa)
transmembrane_regions id=18248149 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
S36_SO-2_scaffold_30542_3
unknown

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comp(1087..1305)
DNA (219bp) protein (73aa)

This feature has no annotations

S36_SO-2_scaffold_30542_4
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(1662..2834)
DNA (1173bp) protein (391aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00136}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00136};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00136};; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00136}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
S-adenosylmethionine synthase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKT5_THELI
S36_SO-2_scaffold_30542_5
AR5, Aenigmarchaeota, DPANN, Archaea

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2965..3642
DNA (678bp) protein (226aa)
Putative uncharacterized protein id=3895633 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metallophosphoesterase
Tax=AR5
S36_SO-2_scaffold_30542_6

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3639..6419
DNA (2781bp) protein (927aa)
ATP dependent helicase, Lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=18248564 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ATP-dependent helicase Lhr and Lhr-like protein helicase {ECO:0000313|EMBL:KHO47399.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO47399.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DEAD/DEAH box helicase domain-containing protein
S36_SO-2_scaffold_30542_7
unknown

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comp(6936..7040)
DNA (105bp) protein (35aa)

This feature has no annotations

S36_SO-2_scaffold_30542_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7175..8890)
DNA (1716bp) protein (572aa)
DNA polymerase X family (EC:2.7.7.7)
nis:NIS_1287 family X DNA polymerase IV; K02347 DNA polymerase (family X) id=133327 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
S36_SO-2_scaffold_30542_9
unknown

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comp(9037..9660)
DNA (624bp) protein (208aa)

This feature has no annotations

S36_SO-2_scaffold_30542_10

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comp(9974..11233)
DNA (1260bp) protein (420aa)
Dihydroorotase n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E81_9ARCH
Dihydroorotase {ECO:0000313|EMBL:AAU82296.1}; TaxID=285397 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos13E1.;"
Allantoinase
S36_SO-2_scaffold_30542_11

Not on your lists

comp(11235..12041)
DNA (807bp) protein (269aa)
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:KHO50400.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
dihydroorotate dehydrogenase electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit id=5041871 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
pyrK; putative dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
S36_SO-2_scaffold_30542_12
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(12034..12948)
DNA (915bp) protein (305aa)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=5041870 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
dihydroorotate dehydrogenase
Tax=CG_Woesearch_01
S36_SO-2_scaffold_30542_13
CG_Micra_02, Micraarchaeota, Archaea

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comp(12949..13662)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5R2_9ARCH
hypothetical protein
Tax=CG_Micra_02
S36_SO-2_scaffold_30542_14

Not on your lists

comp(13662..14366)
DNA (705bp) protein (235aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=uncultured archaeon GZfos28G7 RepID=Q64AV7_9ARCH
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:AAU83470.1}; TaxID=285381 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos28G7.;"
S36_SO-2_scaffold_30542_15
AR5, Aenigmarchaeota, DPANN, Archaea

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14816..15730
DNA (915bp) protein (305aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5047663 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
methionine aminopeptidase (EC:3.4.11.18)
Tax=AR5
S36_SO-2_scaffold_30542_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15870..16400
DNA (531bp) protein (177aa)
id=4201025 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR5
S36_SO-2_scaffold_30542_17
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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16432..17301
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037346BC
putative hydrolase or acyltransferase of alpha/beta superfamily
Tax=RBG_13_RIF_OD1_08_37_53_curated
S36_SO-2_scaffold_30542_18
GWE2_OD1_42_7, Magasanikbacteria, Parcubacteria, Bacteria

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17301..18095
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Vibrio nigripulchritudo ATCC 27043 RepID=F9TJC0_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KKS71633.1}; TaxID=1619052 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWE2_42_7.;"
S36_SO-2_scaffold_30542_19
unknown

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comp(18190..18417)
DNA (228bp) protein (76aa)

This feature has no annotations

S36_SO-2_scaffold_30542_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(18454..18957)
DNA (504bp) protein (168aa)
hypothetical protein id=5047666 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=AR5
S36_SO-2_scaffold_30542_21
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(18964..22620)
DNA (3657bp) protein (1219aa)
AAA family ATPase, CDC48 subfamily id=4201021 bin=PER_GWC2_41_7 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
ATPase AAA
Tax=AR5
S36_SO-2_scaffold_30542_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(22648..22992)
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=18248575 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
S36_SO-2_scaffold_30542_23

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23093..23776
DNA (684bp) protein (228aa)
RecA/RadA recombinase id=4201017 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
DNA repair and recombination protein DNA repair protein RadB {ECO:0000313|EMBL:KHO47411.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA repair and recombination protein radB
S36_SO-2_scaffold_30542_24
unknown

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24290..24394
DNA (105bp) protein (35aa)

This feature has no annotations

S36_SO-2_scaffold_30542_25
unknown

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24399..24704
DNA (306bp) protein (102aa)

This feature has no annotations

S36_SO-2_scaffold_30542_26
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(25218..26141)
DNA (924bp) protein (308aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Aspartate carbamoyltransferase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HII0_PYRSN
aspartate carbamoyltransferase
S36_SO-2_scaffold_30542_27
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(26214..26936)
DNA (723bp) protein (241aa)
Putative Zn-dependent hydrolases of the beta-lactamase fold protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BKZ1_9EURY
putative Zn-dependent hydrolases of the beta-lactamase fold protein
Putative Zn-dependent hydrolases of the beta-lactamase fold protein {ECO:0000313|EMBL:AGK61201.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
S36_SO-2_scaffold_30542_28

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comp(26946..29174)
DNA (2229bp) protein (743aa)
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=18248581 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA topoisomerase I
S36_SO-2_scaffold_30542_29
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(29183..30286)
DNA (1104bp) protein (368aa)
alias=gwa2_scaffold_2089_21 id=18248582 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
S36_SO-2_scaffold_30542_30
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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comp(30435..32639)
DNA (2205bp) protein (735aa)
rci:RCIX2726 hypothetical protein id=1241642 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_51_36_curated
Displaying items 1-30 of 378 in total

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